Gene : Phvul.001G253900 P. vulgaris v2.1
Genomic Order:  2519 Name:  ? Phvul.001G253900
Secondary Identifier:  ? PAC:37168525
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G253900 0.5kb upstream 0.5kb upstream 1535 true Chr01: 50383476-50385010 Phaseolus vulgaris
Phvul.001G253900 0.5kb upstream 0.5kb upstream 500 false Chr01: 50383476-50383975 Phaseolus vulgaris
Phvul.001G253900 0.5kb downstream 0.5kb downstream 1535 true Chr01: 50383976-50385510 Phaseolus vulgaris
Phvul.001G253900 0.5kb downstream 0.5kb downstream 500 false Chr01: 50385011-50385510 Phaseolus vulgaris
Phvul.001G253900 1.0kb upstream 1.0kb upstream 2035 true Chr01: 50382976-50385010 Phaseolus vulgaris
Phvul.001G253900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50382976-50383975 Phaseolus vulgaris
Phvul.001G253900 1.0kb downstream 1.0kb downstream 2035 true Chr01: 50383976-50386010 Phaseolus vulgaris
Phvul.001G253900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50385011-50386010 Phaseolus vulgaris
Phvul.001G253900 2.0kb upstream 2.0kb upstream 3035 true Chr01: 50381976-50385010 Phaseolus vulgaris
Phvul.001G253900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50381976-50383975 Phaseolus vulgaris
Phvul.001G253900 2.0kb downstream 2.0kb downstream 3035 true Chr01: 50383976-50387010 Phaseolus vulgaris
Phvul.001G253900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50385011-50387010 Phaseolus vulgaris
Phvul.001G253900 5.0kb upstream 5.0kb upstream 6035 true Chr01: 50378976-50385010 Phaseolus vulgaris
Phvul.001G253900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50378976-50383975 Phaseolus vulgaris
Phvul.001G253900 5.0kb downstream 5.0kb downstream 6035 true Chr01: 50383976-50390010 Phaseolus vulgaris
Phvul.001G253900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50385011-50390010 Phaseolus vulgaris
Phvul.001G253900 10.0kb upstream 10.0kb upstream 11035 true Chr01: 50373976-50385010 Phaseolus vulgaris
Phvul.001G253900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50373976-50383975 Phaseolus vulgaris
Phvul.001G253900 10.0kb downstream 10.0kb downstream 11035 true Chr01: 50383976-50395010 Phaseolus vulgaris
Phvul.001G253900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50385011-50395010 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314374 5265 Fabidae View MSA
124071239 5270 Rosid View MSA
123750845 5271 Pentapetalae View MSA
122791847 5272 Eudicot View MSA
122049907 5273 Angiosperm View MSA
121311645 5274 Embryophyte View MSA
123348915 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.71664 0.0 22.5034    
cufflinks 0.603005 0.0 2.29577    
cufflinks 0.059575 0.0 0.278257 Low Low
cufflinks 0.541084 0.0 2.07211 Low  
cufflinks 4.25161 0.0 13.316    
cufflinks 0.478191 0.0 1.85332 Low  
cufflinks 32.015 0.0 83.0881 High High
cufflinks 8.85471 0.0 25.3214    
cufflinks 17.465 0.0 46.8874   High
cufflinks 0.394198 0.0 1.55349    
cufflinks 0.459326 0.0 1.78285 Low  

0 Strain