Gene : Phvul.001G253300 P. vulgaris v2.1
Defline:  (1 of 22) K07904 - Ras-related protein Rab-11A (RAB11A) Genomic Order:  2513
Name:  ? Phvul.001G253300 Secondary Identifier:  ? PAC:37169451
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G253300 0.5kb upstream 0.5kb upstream 4369 true Chr01: 50349688-50354056 Phaseolus vulgaris
Phvul.001G253300 0.5kb upstream 0.5kb upstream 500 false Chr01: 50349688-50350187 Phaseolus vulgaris
Phvul.001G253300 0.5kb downstream 0.5kb downstream 4369 true Chr01: 50350188-50354556 Phaseolus vulgaris
Phvul.001G253300 0.5kb downstream 0.5kb downstream 500 false Chr01: 50354057-50354556 Phaseolus vulgaris
Phvul.001G253300 1.0kb upstream 1.0kb upstream 4869 true Chr01: 50349188-50354056 Phaseolus vulgaris
Phvul.001G253300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50349188-50350187 Phaseolus vulgaris
Phvul.001G253300 1.0kb downstream 1.0kb downstream 4869 true Chr01: 50350188-50355056 Phaseolus vulgaris
Phvul.001G253300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50354057-50355056 Phaseolus vulgaris
Phvul.001G253300 2.0kb upstream 2.0kb upstream 5869 true Chr01: 50348188-50354056 Phaseolus vulgaris
Phvul.001G253300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50348188-50350187 Phaseolus vulgaris
Phvul.001G253300 2.0kb downstream 2.0kb downstream 5869 true Chr01: 50350188-50356056 Phaseolus vulgaris
Phvul.001G253300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50354057-50356056 Phaseolus vulgaris
Phvul.001G253300 5.0kb upstream 5.0kb upstream 8869 true Chr01: 50345188-50354056 Phaseolus vulgaris
Phvul.001G253300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50345188-50350187 Phaseolus vulgaris
Phvul.001G253300 5.0kb downstream 5.0kb downstream 8869 true Chr01: 50350188-50359056 Phaseolus vulgaris
Phvul.001G253300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50354057-50359056 Phaseolus vulgaris
Phvul.001G253300 10.0kb upstream 10.0kb upstream 13869 true Chr01: 50340188-50354056 Phaseolus vulgaris
Phvul.001G253300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50340188-50350187 Phaseolus vulgaris
Phvul.001G253300 10.0kb downstream 10.0kb downstream 13869 true Chr01: 50350188-50364056 Phaseolus vulgaris
Phvul.001G253300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50354057-50364056 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312719 5265 Fabidae View MSA
124067588 5270 Rosid View MSA
123750991 5271 Pentapetalae View MSA
122787491 5272 Eudicot View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5578 0.0 31.8095   Low
cufflinks 19.5737 0.0 51.6059    
cufflinks 14.9004 0.0 40.1525    
cufflinks 28.0202 0.0 72.7334   High
cufflinks 16.8615 0.0 45.1486    
cufflinks 14.4343 0.0 38.9253    
cufflinks 17.37 0.0 46.0579    
cufflinks 18.1575 0.0 48.0096    
cufflinks 14.6986 0.0 39.3949    
cufflinks 11.6751 0.0 32.0743   Low
cufflinks 25.2803 0.0 65.8314   High

0 Strain