Gene : Phvul.001G256300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR24012:SF415 - F12A21.10-RELATED Genomic Order:  2544
Name:  ? Phvul.001G256300 Secondary Identifier:  ? PAC:37171172
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G256300 0.5kb upstream 0.5kb upstream 3533 true Chr01: 50554368-50557900 Phaseolus vulgaris
Phvul.001G256300 0.5kb upstream 0.5kb upstream 500 false Chr01: 50557401-50557900 Phaseolus vulgaris
Phvul.001G256300 0.5kb downstream 0.5kb downstream 3533 true Chr01: 50553868-50557400 Phaseolus vulgaris
Phvul.001G256300 0.5kb downstream 0.5kb downstream 500 false Chr01: 50553868-50554367 Phaseolus vulgaris
Phvul.001G256300 1.0kb upstream 1.0kb upstream 4033 true Chr01: 50554368-50558400 Phaseolus vulgaris
Phvul.001G256300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50557401-50558400 Phaseolus vulgaris
Phvul.001G256300 1.0kb downstream 1.0kb downstream 4033 true Chr01: 50553368-50557400 Phaseolus vulgaris
Phvul.001G256300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50553368-50554367 Phaseolus vulgaris
Phvul.001G256300 2.0kb upstream 2.0kb upstream 5033 true Chr01: 50554368-50559400 Phaseolus vulgaris
Phvul.001G256300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50557401-50559400 Phaseolus vulgaris
Phvul.001G256300 2.0kb downstream 2.0kb downstream 5033 true Chr01: 50552368-50557400 Phaseolus vulgaris
Phvul.001G256300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50552368-50554367 Phaseolus vulgaris
Phvul.001G256300 5.0kb upstream 5.0kb upstream 8033 true Chr01: 50554368-50562400 Phaseolus vulgaris
Phvul.001G256300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50557401-50562400 Phaseolus vulgaris
Phvul.001G256300 5.0kb downstream 5.0kb downstream 8033 true Chr01: 50549368-50557400 Phaseolus vulgaris
Phvul.001G256300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50549368-50554367 Phaseolus vulgaris
Phvul.001G256300 10.0kb upstream 10.0kb upstream 13033 true Chr01: 50554368-50567400 Phaseolus vulgaris
Phvul.001G256300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50557401-50567400 Phaseolus vulgaris
Phvul.001G256300 10.0kb downstream 10.0kb downstream 13033 true Chr01: 50544368-50557400 Phaseolus vulgaris
Phvul.001G256300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50544368-50554367 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300992 5265 Fabidae View MSA
124070321 5270 Rosid View MSA
123745062 5271 Pentapetalae View MSA
122789647 5272 Eudicot View MSA
122044254 5273 Angiosperm View MSA
121348969 5274 Embryophyte View MSA
123381105 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.41969 0.0 4.4762    
cufflinks 2.92865 0.0 8.4933   High
cufflinks 0.0427191 0.0 0.18619 Low Low
cufflinks 0.527987 0.0 1.84627 Low  
cufflinks 2.59565 0.0 7.59194   High
cufflinks 0.454235 0.0 1.62159 Low  
cufflinks 0.553718 0.0 1.91746 Low  
cufflinks 0.311301 0.0 1.14645 Low  
cufflinks 1.44982 0.0 4.50472    
cufflinks 0.0453269 0.0 0.196712 Low Low
cufflinks 1.8226 0.0 5.55474    

0 Strain