Gene : Phvul.001G256700 P. vulgaris v2.1
Defline:  (1 of 1) K09497 - T-complex protein 1 subunit epsilon (CCT5) Genomic Order:  2548
Name:  ? Phvul.001G256700 Secondary Identifier:  ? PAC:37170221
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G256700 0.5kb upstream 0.5kb upstream 4970 true Chr01: 50583833-50588802 Phaseolus vulgaris
Phvul.001G256700 0.5kb upstream 0.5kb upstream 500 false Chr01: 50583833-50584332 Phaseolus vulgaris
Phvul.001G256700 0.5kb downstream 0.5kb downstream 4970 true Chr01: 50584333-50589302 Phaseolus vulgaris
Phvul.001G256700 0.5kb downstream 0.5kb downstream 500 false Chr01: 50588803-50589302 Phaseolus vulgaris
Phvul.001G256700 1.0kb upstream 1.0kb upstream 5470 true Chr01: 50583333-50588802 Phaseolus vulgaris
Phvul.001G256700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50583333-50584332 Phaseolus vulgaris
Phvul.001G256700 1.0kb downstream 1.0kb downstream 5470 true Chr01: 50584333-50589802 Phaseolus vulgaris
Phvul.001G256700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50588803-50589802 Phaseolus vulgaris
Phvul.001G256700 2.0kb upstream 2.0kb upstream 6470 true Chr01: 50582333-50588802 Phaseolus vulgaris
Phvul.001G256700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50582333-50584332 Phaseolus vulgaris
Phvul.001G256700 2.0kb downstream 2.0kb downstream 6470 true Chr01: 50584333-50590802 Phaseolus vulgaris
Phvul.001G256700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50588803-50590802 Phaseolus vulgaris
Phvul.001G256700 5.0kb upstream 5.0kb upstream 9470 true Chr01: 50579333-50588802 Phaseolus vulgaris
Phvul.001G256700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50579333-50584332 Phaseolus vulgaris
Phvul.001G256700 5.0kb downstream 5.0kb downstream 9470 true Chr01: 50584333-50593802 Phaseolus vulgaris
Phvul.001G256700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50588803-50593802 Phaseolus vulgaris
Phvul.001G256700 10.0kb upstream 10.0kb upstream 14470 true Chr01: 50574333-50588802 Phaseolus vulgaris
Phvul.001G256700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50574333-50584332 Phaseolus vulgaris
Phvul.001G256700 10.0kb downstream 10.0kb downstream 14470 true Chr01: 50584333-50598802 Phaseolus vulgaris
Phvul.001G256700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50588803-50598802 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306486 5265 Fabidae View MSA
124068195 5270 Rosid View MSA
123739090 5271 Pentapetalae View MSA
122792390 5272 Eudicot View MSA
122043511 5273 Angiosperm View MSA
121350582 5274 Embryophyte View MSA
123425092 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.9299 0.0 138.361 High Low
cufflinks 103.67 0.0 304.82 High High
cufflinks 43.1415 0.0 114.939 High Low
cufflinks 74.1278 0.0 208.233 High  
cufflinks 83.9395 0.0 239.434 High  
cufflinks 50.9164 0.0 137.954 High Low
cufflinks 77.8122 0.0 221.744 High  
cufflinks 79.2955 0.0 225.822 High  
cufflinks 105.061 0.0 310.693 High High
cufflinks 48.6189 0.0 131.368 High Low
cufflinks 89.838 0.0 259.375 High  

0 Strain