Gene : Phvul.001G257000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12428:SF18 - ALBINO3-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  2551
Name:  ? Phvul.001G257000 Secondary Identifier:  ? PAC:37169140
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G257000 0.5kb upstream 0.5kb upstream 6074 true Chr01: 50607165-50613238 Phaseolus vulgaris
Phvul.001G257000 0.5kb upstream 0.5kb upstream 500 false Chr01: 50612739-50613238 Phaseolus vulgaris
Phvul.001G257000 0.5kb downstream 0.5kb downstream 6074 true Chr01: 50606665-50612738 Phaseolus vulgaris
Phvul.001G257000 0.5kb downstream 0.5kb downstream 500 false Chr01: 50606665-50607164 Phaseolus vulgaris
Phvul.001G257000 1.0kb upstream 1.0kb upstream 6574 true Chr01: 50607165-50613738 Phaseolus vulgaris
Phvul.001G257000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50612739-50613738 Phaseolus vulgaris
Phvul.001G257000 1.0kb downstream 1.0kb downstream 6574 true Chr01: 50606165-50612738 Phaseolus vulgaris
Phvul.001G257000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50606165-50607164 Phaseolus vulgaris
Phvul.001G257000 2.0kb upstream 2.0kb upstream 7574 true Chr01: 50607165-50614738 Phaseolus vulgaris
Phvul.001G257000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50612739-50614738 Phaseolus vulgaris
Phvul.001G257000 2.0kb downstream 2.0kb downstream 7574 true Chr01: 50605165-50612738 Phaseolus vulgaris
Phvul.001G257000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50605165-50607164 Phaseolus vulgaris
Phvul.001G257000 5.0kb upstream 5.0kb upstream 10574 true Chr01: 50607165-50617738 Phaseolus vulgaris
Phvul.001G257000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50612739-50617738 Phaseolus vulgaris
Phvul.001G257000 5.0kb downstream 5.0kb downstream 10574 true Chr01: 50602165-50612738 Phaseolus vulgaris
Phvul.001G257000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50602165-50607164 Phaseolus vulgaris
Phvul.001G257000 10.0kb upstream 10.0kb upstream 15574 true Chr01: 50607165-50622738 Phaseolus vulgaris
Phvul.001G257000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50612739-50622738 Phaseolus vulgaris
Phvul.001G257000 10.0kb downstream 10.0kb downstream 15574 true Chr01: 50597165-50612738 Phaseolus vulgaris
Phvul.001G257000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50597165-50607164 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304757 5265 Fabidae View MSA
124067959 5270 Rosid View MSA
123740459 5271 Pentapetalae View MSA
122792241 5272 Eudicot View MSA
122043512 5273 Angiosperm View MSA
121310140 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6613 0.0 45.7556    
cufflinks 15.1619 0.0 39.4699    
cufflinks 100.795 0.0 288.611 High High
cufflinks 7.33753 0.0 20.0499   Low
cufflinks 13.9997 0.0 36.5685    
cufflinks 37.3415 0.0 97.67 High High
cufflinks 9.31763 0.0 24.8968    
cufflinks 7.76132 0.0 21.0083    
cufflinks 9.83603 0.0 26.2248    
cufflinks 22.3021 0.0 57.6469    
cufflinks 12.6701 0.0 33.2765    

0 Strain