Gene : Phvul.001G257100 P. vulgaris v2.1
Defline:  (1 of 2) K02723 - photosystem II PsbY protein (psbY) Genomic Order:  2552
Name:  ? Phvul.001G257100 Secondary Identifier:  ? PAC:37169221
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G257100 0.5kb upstream 0.5kb upstream 1265 true Chr01: 50614788-50616052 Phaseolus vulgaris
Phvul.001G257100 0.5kb upstream 0.5kb upstream 500 false Chr01: 50614788-50615287 Phaseolus vulgaris
Phvul.001G257100 0.5kb downstream 0.5kb downstream 1265 true Chr01: 50615288-50616552 Phaseolus vulgaris
Phvul.001G257100 0.5kb downstream 0.5kb downstream 500 false Chr01: 50616053-50616552 Phaseolus vulgaris
Phvul.001G257100 1.0kb upstream 1.0kb upstream 1765 true Chr01: 50614288-50616052 Phaseolus vulgaris
Phvul.001G257100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50614288-50615287 Phaseolus vulgaris
Phvul.001G257100 1.0kb downstream 1.0kb downstream 1765 true Chr01: 50615288-50617052 Phaseolus vulgaris
Phvul.001G257100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50616053-50617052 Phaseolus vulgaris
Phvul.001G257100 2.0kb upstream 2.0kb upstream 2765 true Chr01: 50613288-50616052 Phaseolus vulgaris
Phvul.001G257100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50613288-50615287 Phaseolus vulgaris
Phvul.001G257100 2.0kb downstream 2.0kb downstream 2765 true Chr01: 50615288-50618052 Phaseolus vulgaris
Phvul.001G257100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50616053-50618052 Phaseolus vulgaris
Phvul.001G257100 5.0kb upstream 5.0kb upstream 5765 true Chr01: 50610288-50616052 Phaseolus vulgaris
Phvul.001G257100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50610288-50615287 Phaseolus vulgaris
Phvul.001G257100 5.0kb downstream 5.0kb downstream 5765 true Chr01: 50615288-50621052 Phaseolus vulgaris
Phvul.001G257100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50616053-50621052 Phaseolus vulgaris
Phvul.001G257100 10.0kb upstream 10.0kb upstream 10765 true Chr01: 50605288-50616052 Phaseolus vulgaris
Phvul.001G257100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50605288-50615287 Phaseolus vulgaris
Phvul.001G257100 10.0kb downstream 10.0kb downstream 10765 true Chr01: 50615288-50626052 Phaseolus vulgaris
Phvul.001G257100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50616053-50626052 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300647 5265 Fabidae View MSA
124068149 5270 Rosid View MSA
123737018 5271 Pentapetalae View MSA
122795977 5272 Eudicot View MSA
122044260 5273 Angiosperm View MSA
121349394 5274 Embryophyte View MSA
123426328 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.6613 0.0 72.9501    
cufflinks 33.6976 0.0 88.1706 High  
cufflinks 192.155 0.0 527.27 High High
cufflinks 23.2765 0.0 62.0339    
cufflinks 20.6075 0.0 55.6298    
cufflinks 61.7511 0.0 159.644 High  
cufflinks 1.51863 0.0 5.38301   Low
cufflinks 2.01191 0.0 6.98701   Low
cufflinks 1.61835 0.0 5.70903   Low
cufflinks 20.7867 0.0 56.14    
cufflinks 15.7981 0.0 43.5054    

0 Strain