Gene : Phvul.001G255400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12735:SF11 - SUFE-LIKE PROTEIN 2, CHLOROPLASTIC Genomic Order:  2535
Name:  ? Phvul.001G255400 Secondary Identifier:  ? PAC:37170230
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G255400 0.5kb upstream 0.5kb upstream 1064 true Chr01: 50489729-50490792 Phaseolus vulgaris
Phvul.001G255400 0.5kb upstream 0.5kb upstream 500 false Chr01: 50490293-50490792 Phaseolus vulgaris
Phvul.001G255400 0.5kb downstream 0.5kb downstream 1064 true Chr01: 50489229-50490292 Phaseolus vulgaris
Phvul.001G255400 0.5kb downstream 0.5kb downstream 500 false Chr01: 50489229-50489728 Phaseolus vulgaris
Phvul.001G255400 1.0kb upstream 1.0kb upstream 1564 true Chr01: 50489729-50491292 Phaseolus vulgaris
Phvul.001G255400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50490293-50491292 Phaseolus vulgaris
Phvul.001G255400 1.0kb downstream 1.0kb downstream 1564 true Chr01: 50488729-50490292 Phaseolus vulgaris
Phvul.001G255400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50488729-50489728 Phaseolus vulgaris
Phvul.001G255400 2.0kb upstream 2.0kb upstream 2564 true Chr01: 50489729-50492292 Phaseolus vulgaris
Phvul.001G255400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50490293-50492292 Phaseolus vulgaris
Phvul.001G255400 2.0kb downstream 2.0kb downstream 2564 true Chr01: 50487729-50490292 Phaseolus vulgaris
Phvul.001G255400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50487729-50489728 Phaseolus vulgaris
Phvul.001G255400 5.0kb upstream 5.0kb upstream 5564 true Chr01: 50489729-50495292 Phaseolus vulgaris
Phvul.001G255400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50490293-50495292 Phaseolus vulgaris
Phvul.001G255400 5.0kb downstream 5.0kb downstream 5564 true Chr01: 50484729-50490292 Phaseolus vulgaris
Phvul.001G255400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50484729-50489728 Phaseolus vulgaris
Phvul.001G255400 10.0kb upstream 10.0kb upstream 10564 true Chr01: 50489729-50500292 Phaseolus vulgaris
Phvul.001G255400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50490293-50500292 Phaseolus vulgaris
Phvul.001G255400 10.0kb downstream 10.0kb downstream 10564 true Chr01: 50479729-50490292 Phaseolus vulgaris
Phvul.001G255400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50479729-50489728 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026610 5273 Angiosperm View MSA
123738907 5271 Pentapetalae View MSA
122311971 5265 Fabidae View MSA
124070856 5270 Rosid View MSA
122794686 5272 Eudicot View MSA
121351730 5274 Embryophyte View MSA
123428426 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.71231 0.0 6.40552    
cufflinks 1.72748 0.0 6.49935    
cufflinks 0.158278 0.0 0.739272 Low Low
cufflinks 1.83475 0.0 6.73555    
cufflinks 0.625976 0.0 2.53028 Low  
cufflinks 1.3461 0.0 5.18163    
cufflinks 1.14779 0.0 4.44038    
cufflinks 1.40808 0.0 5.41237    
cufflinks 0.747324 0.0 2.98472    
cufflinks 3.36488 0.0 11.8711   High
cufflinks 0.892193 0.0 3.50474    

0 Strain