Gene : Phvul.001G256000 P. vulgaris v2.1
Defline:  (1 of 1) K18723 - nucleoporin GLE1 (GLE1) Genomic Order:  2541
Name:  ? Phvul.001G256000 Secondary Identifier:  ? PAC:37168186
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G256000 0.5kb upstream 0.5kb upstream 7614 true Chr01: 50530440-50538053 Phaseolus vulgaris
Phvul.001G256000 0.5kb upstream 0.5kb upstream 500 false Chr01: 50537554-50538053 Phaseolus vulgaris
Phvul.001G256000 0.5kb downstream 0.5kb downstream 7614 true Chr01: 50529940-50537553 Phaseolus vulgaris
Phvul.001G256000 0.5kb downstream 0.5kb downstream 500 false Chr01: 50529940-50530439 Phaseolus vulgaris
Phvul.001G256000 1.0kb upstream 1.0kb upstream 8114 true Chr01: 50530440-50538553 Phaseolus vulgaris
Phvul.001G256000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50537554-50538553 Phaseolus vulgaris
Phvul.001G256000 1.0kb downstream 1.0kb downstream 8114 true Chr01: 50529440-50537553 Phaseolus vulgaris
Phvul.001G256000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50529440-50530439 Phaseolus vulgaris
Phvul.001G256000 2.0kb upstream 2.0kb upstream 9114 true Chr01: 50530440-50539553 Phaseolus vulgaris
Phvul.001G256000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50537554-50539553 Phaseolus vulgaris
Phvul.001G256000 2.0kb downstream 2.0kb downstream 9114 true Chr01: 50528440-50537553 Phaseolus vulgaris
Phvul.001G256000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50528440-50530439 Phaseolus vulgaris
Phvul.001G256000 5.0kb upstream 5.0kb upstream 12114 true Chr01: 50530440-50542553 Phaseolus vulgaris
Phvul.001G256000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50537554-50542553 Phaseolus vulgaris
Phvul.001G256000 5.0kb downstream 5.0kb downstream 12114 true Chr01: 50525440-50537553 Phaseolus vulgaris
Phvul.001G256000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50525440-50530439 Phaseolus vulgaris
Phvul.001G256000 10.0kb upstream 10.0kb upstream 17114 true Chr01: 50530440-50547553 Phaseolus vulgaris
Phvul.001G256000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50537554-50547553 Phaseolus vulgaris
Phvul.001G256000 10.0kb downstream 10.0kb downstream 17114 true Chr01: 50520440-50537553 Phaseolus vulgaris
Phvul.001G256000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50520440-50530439 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303504 5265 Fabidae View MSA
124065285 5270 Rosid View MSA
123740284 5271 Pentapetalae View MSA
122790886 5272 Eudicot View MSA
122045266 5273 Angiosperm View MSA
121346292 5274 Embryophyte View MSA
123425199 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.44824 0.0 7.30244   Low
cufflinks 5.08379 0.0 14.0966    
cufflinks 5.36366 0.0 14.8124    
cufflinks 1.87118 0.0 5.80962   Low
cufflinks 4.25509 0.0 12.0665    
cufflinks 5.68561 0.0 15.6112    
cufflinks 5.85511 0.0 15.9643    
cufflinks 5.21373 0.0 14.3352    
cufflinks 5.42797 0.0 14.9158    
cufflinks 3.37751 0.0 9.76481    
cufflinks 4.5039 0.0 12.6567    

0 Strain