Gene : Phvul.001G256200 P. vulgaris v2.1
Defline:  (1 of 24) K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Genomic Order:  2543
Name:  ? Phvul.001G256200 Secondary Identifier:  ? PAC:37170204
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G256200 0.5kb upstream 0.5kb upstream 6577 true Chr01: 50542843-50549419 Phaseolus vulgaris
Phvul.001G256200 0.5kb upstream 0.5kb upstream 500 false Chr01: 50548920-50549419 Phaseolus vulgaris
Phvul.001G256200 0.5kb downstream 0.5kb downstream 6577 true Chr01: 50542343-50548919 Phaseolus vulgaris
Phvul.001G256200 0.5kb downstream 0.5kb downstream 500 false Chr01: 50542343-50542842 Phaseolus vulgaris
Phvul.001G256200 1.0kb upstream 1.0kb upstream 7077 true Chr01: 50542843-50549919 Phaseolus vulgaris
Phvul.001G256200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50548920-50549919 Phaseolus vulgaris
Phvul.001G256200 1.0kb downstream 1.0kb downstream 7077 true Chr01: 50541843-50548919 Phaseolus vulgaris
Phvul.001G256200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50541843-50542842 Phaseolus vulgaris
Phvul.001G256200 2.0kb upstream 2.0kb upstream 8077 true Chr01: 50542843-50550919 Phaseolus vulgaris
Phvul.001G256200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50548920-50550919 Phaseolus vulgaris
Phvul.001G256200 2.0kb downstream 2.0kb downstream 8077 true Chr01: 50540843-50548919 Phaseolus vulgaris
Phvul.001G256200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50540843-50542842 Phaseolus vulgaris
Phvul.001G256200 5.0kb upstream 5.0kb upstream 11077 true Chr01: 50542843-50553919 Phaseolus vulgaris
Phvul.001G256200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50548920-50553919 Phaseolus vulgaris
Phvul.001G256200 5.0kb downstream 5.0kb downstream 11077 true Chr01: 50537843-50548919 Phaseolus vulgaris
Phvul.001G256200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50537843-50542842 Phaseolus vulgaris
Phvul.001G256200 10.0kb upstream 10.0kb upstream 16077 true Chr01: 50542843-50558919 Phaseolus vulgaris
Phvul.001G256200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50548920-50558919 Phaseolus vulgaris
Phvul.001G256200 10.0kb downstream 10.0kb downstream 16077 true Chr01: 50532843-50548919 Phaseolus vulgaris
Phvul.001G256200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50532843-50542842 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307777 5265 Fabidae View MSA
124072133 5270 Rosid View MSA
123745153 5271 Pentapetalae View MSA
122796432 5272 Eudicot View MSA
122043732 5273 Angiosperm View MSA
121347881 5274 Embryophyte View MSA
123380663 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0539652 0.0 0.230145 Low  
cufflinks 0.383397 0.0 1.54735 Low  
cufflinks 0.0130153 0.0 0.164726 Low Low
cufflinks 0.0782767 0.0 0.347567 Low  
cufflinks 0.110186 0.0 0.565449 Low  
cufflinks 0.0484561 0.0 0.336972 Low  
cufflinks 0.717048 0.0 2.42317   High
cufflinks 1.33892 0.0 4.02629   High
cufflinks 0.248545 0.0 1.03557 Low  
cufflinks 0.218573 0.0 0.969474 Low  
cufflinks 0.266008 0.0 1.20162 Low  

0 Strain