Gene : Phvul.002G105000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11670:SF40 - ACONITATE HYDRATASE 1 Genomic Order:  1051
Name:  ? Phvul.002G105000 Secondary Identifier:  ? PAC:37175147
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLYOXYLATE-BYPASS Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PWY-561 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5690 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6549 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G105000 0.5kb upstream 0.5kb upstream 8847 true Chr02: 22335199-22344045 Phaseolus vulgaris
Phvul.002G105000 0.5kb upstream 0.5kb upstream 500 false Chr02: 22343546-22344045 Phaseolus vulgaris
Phvul.002G105000 0.5kb downstream 0.5kb downstream 8847 true Chr02: 22334699-22343545 Phaseolus vulgaris
Phvul.002G105000 0.5kb downstream 0.5kb downstream 500 false Chr02: 22334699-22335198 Phaseolus vulgaris
Phvul.002G105000 1.0kb upstream 1.0kb upstream 9347 true Chr02: 22335199-22344545 Phaseolus vulgaris
Phvul.002G105000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 22343546-22344545 Phaseolus vulgaris
Phvul.002G105000 1.0kb downstream 1.0kb downstream 9347 true Chr02: 22334199-22343545 Phaseolus vulgaris
Phvul.002G105000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 22334199-22335198 Phaseolus vulgaris
Phvul.002G105000 2.0kb upstream 2.0kb upstream 10347 true Chr02: 22335199-22345545 Phaseolus vulgaris
Phvul.002G105000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 22343546-22345545 Phaseolus vulgaris
Phvul.002G105000 2.0kb downstream 2.0kb downstream 10347 true Chr02: 22333199-22343545 Phaseolus vulgaris
Phvul.002G105000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 22333199-22335198 Phaseolus vulgaris
Phvul.002G105000 5.0kb upstream 5.0kb upstream 13347 true Chr02: 22335199-22348545 Phaseolus vulgaris
Phvul.002G105000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 22343546-22348545 Phaseolus vulgaris
Phvul.002G105000 5.0kb downstream 5.0kb downstream 13347 true Chr02: 22330199-22343545 Phaseolus vulgaris
Phvul.002G105000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 22330199-22335198 Phaseolus vulgaris
Phvul.002G105000 10.0kb upstream 10.0kb upstream 18347 true Chr02: 22335199-22353545 Phaseolus vulgaris
Phvul.002G105000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 22343546-22353545 Phaseolus vulgaris
Phvul.002G105000 10.0kb downstream 10.0kb downstream 18347 true Chr02: 22325199-22343545 Phaseolus vulgaris
Phvul.002G105000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 22325199-22335198 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300043 5265 Fabidae View MSA
124069604 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 74.7089 0.0 220.276 High  
cufflinks 63.8834 0.0 184.045 High  
cufflinks 92.5869 0.0 281.761 High High
cufflinks 49.8494 0.0 138.476 High Low
cufflinks 65.9905 0.0 189.74 High  
cufflinks 62.439 0.0 179.401 High  
cufflinks 78.821 0.0 233.35 High  
cufflinks 63.3216 0.0 182.867 High  
cufflinks 98.4769 0.0 300.402 High High
cufflinks 76.3235 0.0 224.768 High  
cufflinks 68.3708 0.0 197.599 High  

0 Strain