Gene : Phvul.002G108000 P. vulgaris v2.1
Defline:  (1 of 2) 1.6.99.1 - NADPH dehydrogenase / NADPH diaphorase Genomic Order:  1081
Name:  ? Phvul.002G108000 Secondary Identifier:  ? PAC:37175266
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PHOTOALL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-101 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G108000 0.5kb upstream 0.5kb upstream 3409 true Chr02: 23063610-23067018 Phaseolus vulgaris
Phvul.002G108000 0.5kb upstream 0.5kb upstream 500 false Chr02: 23066519-23067018 Phaseolus vulgaris
Phvul.002G108000 0.5kb downstream 0.5kb downstream 3409 true Chr02: 23063110-23066518 Phaseolus vulgaris
Phvul.002G108000 0.5kb downstream 0.5kb downstream 500 false Chr02: 23063110-23063609 Phaseolus vulgaris
Phvul.002G108000 1.0kb upstream 1.0kb upstream 3909 true Chr02: 23063610-23067518 Phaseolus vulgaris
Phvul.002G108000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 23066519-23067518 Phaseolus vulgaris
Phvul.002G108000 1.0kb downstream 1.0kb downstream 3909 true Chr02: 23062610-23066518 Phaseolus vulgaris
Phvul.002G108000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 23062610-23063609 Phaseolus vulgaris
Phvul.002G108000 2.0kb upstream 2.0kb upstream 4909 true Chr02: 23063610-23068518 Phaseolus vulgaris
Phvul.002G108000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 23066519-23068518 Phaseolus vulgaris
Phvul.002G108000 2.0kb downstream 2.0kb downstream 4909 true Chr02: 23061610-23066518 Phaseolus vulgaris
Phvul.002G108000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 23061610-23063609 Phaseolus vulgaris
Phvul.002G108000 5.0kb upstream 5.0kb upstream 7909 true Chr02: 23063610-23071518 Phaseolus vulgaris
Phvul.002G108000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 23066519-23071518 Phaseolus vulgaris
Phvul.002G108000 5.0kb downstream 5.0kb downstream 7909 true Chr02: 23058610-23066518 Phaseolus vulgaris
Phvul.002G108000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 23058610-23063609 Phaseolus vulgaris
Phvul.002G108000 10.0kb upstream 10.0kb upstream 12909 true Chr02: 23063610-23076518 Phaseolus vulgaris
Phvul.002G108000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 23066519-23076518 Phaseolus vulgaris
Phvul.002G108000 10.0kb downstream 10.0kb downstream 12909 true Chr02: 23053610-23066518 Phaseolus vulgaris
Phvul.002G108000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 23053610-23063609 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302692 5265 Fabidae View MSA
124067432 5270 Rosid View MSA
123738149 5271 Pentapetalae View MSA
122792812 5272 Eudicot View MSA
122047092 5273 Angiosperm View MSA
121345417 5274 Embryophyte View MSA
123380214 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.7749 0.0 187.273 High  
cufflinks 67.858 0.0 181.277 High  
cufflinks 525.055 0.0 1944.14 High High
cufflinks 49.9179 0.0 130.333 High  
cufflinks 39.3853 0.0 102.059 High  
cufflinks 148.614 0.0 431.236 High  
cufflinks 1.70738 0.0 5.58871   Low
cufflinks 0.588269 0.0 2.14952   Low
cufflinks 1.6485 0.0 5.41999   Low
cufflinks 77.2107 0.0 208.033 High  
cufflinks 36.5608 0.0 94.6387 High  

0 Strain