Gene : Phvul.002G109500 P. vulgaris v2.1
Genomic Order:  1096 Name:  ? Phvul.002G109500
Secondary Identifier:  ? PAC:37174562
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G109500 0.5kb upstream 0.5kb upstream 1680 true Chr02: 23481012-23482691 Phaseolus vulgaris
Phvul.002G109500 0.5kb upstream 0.5kb upstream 500 false Chr02: 23482192-23482691 Phaseolus vulgaris
Phvul.002G109500 0.5kb downstream 0.5kb downstream 1680 true Chr02: 23480512-23482191 Phaseolus vulgaris
Phvul.002G109500 0.5kb downstream 0.5kb downstream 500 false Chr02: 23480512-23481011 Phaseolus vulgaris
Phvul.002G109500 1.0kb upstream 1.0kb upstream 2180 true Chr02: 23481012-23483191 Phaseolus vulgaris
Phvul.002G109500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 23482192-23483191 Phaseolus vulgaris
Phvul.002G109500 1.0kb downstream 1.0kb downstream 2180 true Chr02: 23480012-23482191 Phaseolus vulgaris
Phvul.002G109500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 23480012-23481011 Phaseolus vulgaris
Phvul.002G109500 2.0kb upstream 2.0kb upstream 3180 true Chr02: 23481012-23484191 Phaseolus vulgaris
Phvul.002G109500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 23482192-23484191 Phaseolus vulgaris
Phvul.002G109500 2.0kb downstream 2.0kb downstream 3180 true Chr02: 23479012-23482191 Phaseolus vulgaris
Phvul.002G109500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 23479012-23481011 Phaseolus vulgaris
Phvul.002G109500 5.0kb upstream 5.0kb upstream 6180 true Chr02: 23481012-23487191 Phaseolus vulgaris
Phvul.002G109500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 23482192-23487191 Phaseolus vulgaris
Phvul.002G109500 5.0kb downstream 5.0kb downstream 6180 true Chr02: 23476012-23482191 Phaseolus vulgaris
Phvul.002G109500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 23476012-23481011 Phaseolus vulgaris
Phvul.002G109500 10.0kb upstream 10.0kb upstream 11180 true Chr02: 23481012-23492191 Phaseolus vulgaris
Phvul.002G109500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 23482192-23492191 Phaseolus vulgaris
Phvul.002G109500 10.0kb downstream 10.0kb downstream 11180 true Chr02: 23471012-23482191 Phaseolus vulgaris
Phvul.002G109500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 23471012-23481011 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309213 5265 Fabidae View MSA
124037182 5270 Rosid View MSA
123741417 5271 Pentapetalae View MSA
122792559 5272 Eudicot View MSA
122048397 5273 Angiosperm View MSA
121310953 5274 Embryophyte View MSA
123348321 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.120064 0.0 0.55264 Low  
cufflinks 0.0550989 0.0 0.275198 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.109057 0.0 0.506583 Low  
cufflinks 0.0981966 0.0 0.461087 Low  
cufflinks 0.151992 0.0 0.682139 Low  
cufflinks 5.38961 0.0 17.3654   High
cufflinks 19.8512 0.0 55.4612   High
cufflinks 2.50297 0.0 8.80419    
cufflinks 0.123035 0.0 0.564221 Low  
cufflinks 0.0586645 0.0 0.291037 Low  

0 Strain