Gene : Phvul.002G109700 P. vulgaris v2.1
Defline:  (1 of 4) K02938 - large subunit ribosomal protein L8e (RP-L8e, RPL8) Genomic Order:  1098
Name:  ? Phvul.002G109700 Secondary Identifier:  ? PAC:37177390
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G109700 0.5kb upstream 0.5kb upstream 2227 true Chr02: 23534187-23536413 Phaseolus vulgaris
Phvul.002G109700 0.5kb upstream 0.5kb upstream 500 false Chr02: 23535914-23536413 Phaseolus vulgaris
Phvul.002G109700 0.5kb downstream 0.5kb downstream 2227 true Chr02: 23533687-23535913 Phaseolus vulgaris
Phvul.002G109700 0.5kb downstream 0.5kb downstream 500 false Chr02: 23533687-23534186 Phaseolus vulgaris
Phvul.002G109700 1.0kb upstream 1.0kb upstream 2727 true Chr02: 23534187-23536913 Phaseolus vulgaris
Phvul.002G109700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 23535914-23536913 Phaseolus vulgaris
Phvul.002G109700 1.0kb downstream 1.0kb downstream 2727 true Chr02: 23533187-23535913 Phaseolus vulgaris
Phvul.002G109700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 23533187-23534186 Phaseolus vulgaris
Phvul.002G109700 2.0kb upstream 2.0kb upstream 3727 true Chr02: 23534187-23537913 Phaseolus vulgaris
Phvul.002G109700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 23535914-23537913 Phaseolus vulgaris
Phvul.002G109700 2.0kb downstream 2.0kb downstream 3727 true Chr02: 23532187-23535913 Phaseolus vulgaris
Phvul.002G109700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 23532187-23534186 Phaseolus vulgaris
Phvul.002G109700 5.0kb upstream 5.0kb upstream 6727 true Chr02: 23534187-23540913 Phaseolus vulgaris
Phvul.002G109700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 23535914-23540913 Phaseolus vulgaris
Phvul.002G109700 5.0kb downstream 5.0kb downstream 6727 true Chr02: 23529187-23535913 Phaseolus vulgaris
Phvul.002G109700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 23529187-23534186 Phaseolus vulgaris
Phvul.002G109700 10.0kb upstream 10.0kb upstream 11727 true Chr02: 23534187-23545913 Phaseolus vulgaris
Phvul.002G109700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 23535914-23545913 Phaseolus vulgaris
Phvul.002G109700 10.0kb downstream 10.0kb downstream 11727 true Chr02: 23524187-23535913 Phaseolus vulgaris
Phvul.002G109700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 23524187-23534186 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312970 5265 Fabidae View MSA
124067986 5270 Rosid View MSA
123745881 5271 Pentapetalae View MSA
122789259 5272 Eudicot View MSA
122042559 5273 Angiosperm View MSA
121350897 5274 Embryophyte View MSA
123424033 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.9571 0.0 173.22 High  
cufflinks 129.999 0.0 361.497 High High
cufflinks 54.4442 0.0 141.599 High Low
cufflinks 125.874 0.0 351.577 High High
cufflinks 109.044 0.0 299.284 High  
cufflinks 53.226 0.0 138.422 High Low
cufflinks 68.1485 0.0 179.83 High  
cufflinks 74.9811 0.0 198.267 High  
cufflinks 102.957 0.0 281.204 High  
cufflinks 68.7669 0.0 181.114 High  
cufflinks 103.903 0.0 283.957 High  

0 Strain