Gene : Phvul.002G110400 P. vulgaris v2.1
Genomic Order:  1105 Name:  ? Phvul.002G110400
Secondary Identifier:  ? PAC:37178403
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G110400 0.5kb upstream 0.5kb upstream 7259 true Chr02: 23639495-23646753 Phaseolus vulgaris
Phvul.002G110400 0.5kb upstream 0.5kb upstream 500 false Chr02: 23646254-23646753 Phaseolus vulgaris
Phvul.002G110400 0.5kb downstream 0.5kb downstream 7259 true Chr02: 23638995-23646253 Phaseolus vulgaris
Phvul.002G110400 0.5kb downstream 0.5kb downstream 500 false Chr02: 23638995-23639494 Phaseolus vulgaris
Phvul.002G110400 1.0kb upstream 1.0kb upstream 7759 true Chr02: 23639495-23647253 Phaseolus vulgaris
Phvul.002G110400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 23646254-23647253 Phaseolus vulgaris
Phvul.002G110400 1.0kb downstream 1.0kb downstream 7759 true Chr02: 23638495-23646253 Phaseolus vulgaris
Phvul.002G110400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 23638495-23639494 Phaseolus vulgaris
Phvul.002G110400 2.0kb upstream 2.0kb upstream 8759 true Chr02: 23639495-23648253 Phaseolus vulgaris
Phvul.002G110400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 23646254-23648253 Phaseolus vulgaris
Phvul.002G110400 2.0kb downstream 2.0kb downstream 8759 true Chr02: 23637495-23646253 Phaseolus vulgaris
Phvul.002G110400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 23637495-23639494 Phaseolus vulgaris
Phvul.002G110400 5.0kb upstream 5.0kb upstream 11759 true Chr02: 23639495-23651253 Phaseolus vulgaris
Phvul.002G110400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 23646254-23651253 Phaseolus vulgaris
Phvul.002G110400 5.0kb downstream 5.0kb downstream 11759 true Chr02: 23634495-23646253 Phaseolus vulgaris
Phvul.002G110400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 23634495-23639494 Phaseolus vulgaris
Phvul.002G110400 10.0kb upstream 10.0kb upstream 16759 true Chr02: 23639495-23656253 Phaseolus vulgaris
Phvul.002G110400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 23646254-23656253 Phaseolus vulgaris
Phvul.002G110400 10.0kb downstream 10.0kb downstream 16759 true Chr02: 23629495-23646253 Phaseolus vulgaris
Phvul.002G110400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 23629495-23639494 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302659 5265 Fabidae View MSA
124062095 5270 Rosid View MSA
123740906 5271 Pentapetalae View MSA
122794568 5272 Eudicot View MSA
122050680 5273 Angiosperm View MSA
121346706 5274 Embryophyte View MSA
123380432 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.95758 0.0 9.28079   Low
cufflinks 2.69845 0.0 8.58167   Low
cufflinks 3.60945 0.0 11.1072    
cufflinks 3.35573 0.0 10.4525    
cufflinks 3.83077 0.0 11.8087    
cufflinks 2.91202 0.0 9.17534   Low
cufflinks 3.77612 0.0 11.5265    
cufflinks 4.22958 0.0 12.7236   High
cufflinks 3.97522 0.0 12.0797    
cufflinks 4.73735 0.0 14.1473   High
cufflinks 3.46684 0.0 10.7727    

0 Strain