Gene : Phvul.002G110900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31989:SF7 - NAC DOMAIN CONTAINING PROTEIN 76-RELATED Genomic Order:  1109
Name:  ? Phvul.002G110900 Secondary Identifier:  ? PAC:37178531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G110900 0.5kb upstream 0.5kb upstream 4923 true Chr02: 23746201-23751123 Phaseolus vulgaris
Phvul.002G110900 0.5kb upstream 0.5kb upstream 500 false Chr02: 23750624-23751123 Phaseolus vulgaris
Phvul.002G110900 0.5kb downstream 0.5kb downstream 4923 true Chr02: 23745701-23750623 Phaseolus vulgaris
Phvul.002G110900 0.5kb downstream 0.5kb downstream 500 false Chr02: 23745701-23746200 Phaseolus vulgaris
Phvul.002G110900 1.0kb upstream 1.0kb upstream 5423 true Chr02: 23746201-23751623 Phaseolus vulgaris
Phvul.002G110900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 23750624-23751623 Phaseolus vulgaris
Phvul.002G110900 1.0kb downstream 1.0kb downstream 5423 true Chr02: 23745201-23750623 Phaseolus vulgaris
Phvul.002G110900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 23745201-23746200 Phaseolus vulgaris
Phvul.002G110900 2.0kb upstream 2.0kb upstream 6423 true Chr02: 23746201-23752623 Phaseolus vulgaris
Phvul.002G110900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 23750624-23752623 Phaseolus vulgaris
Phvul.002G110900 2.0kb downstream 2.0kb downstream 6423 true Chr02: 23744201-23750623 Phaseolus vulgaris
Phvul.002G110900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 23744201-23746200 Phaseolus vulgaris
Phvul.002G110900 5.0kb upstream 5.0kb upstream 9423 true Chr02: 23746201-23755623 Phaseolus vulgaris
Phvul.002G110900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 23750624-23755623 Phaseolus vulgaris
Phvul.002G110900 5.0kb downstream 5.0kb downstream 9423 true Chr02: 23741201-23750623 Phaseolus vulgaris
Phvul.002G110900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 23741201-23746200 Phaseolus vulgaris
Phvul.002G110900 10.0kb upstream 10.0kb upstream 14423 true Chr02: 23746201-23760623 Phaseolus vulgaris
Phvul.002G110900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 23750624-23760623 Phaseolus vulgaris
Phvul.002G110900 10.0kb downstream 10.0kb downstream 14423 true Chr02: 23736201-23750623 Phaseolus vulgaris
Phvul.002G110900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 23736201-23746200 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305941 5265 Fabidae View MSA
124067458 5270 Rosid View MSA
123743841 5271 Pentapetalae View MSA
122796750 5272 Eudicot View MSA
122051975 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.810989 0.0 3.55376   Low
cufflinks 2.38537 0.0 10.7835    
cufflinks 1.84097 0.0 10.1287    
cufflinks 1.37839 0.0 5.48867    
cufflinks 4.28324 0.0 19.0269   High
cufflinks 3.97642 0.0 20.3723   High
cufflinks 2.14099 0.0 9.41399    
cufflinks 0.767467 0.0 3.40547   Low
cufflinks 1.71919 0.0 7.98639    
cufflinks 0.869724 0.0 5.27954   Low
cufflinks 5.9373 0.0 27.1369   High

0 Strain