Gene : Phvul.002G112000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10071:SF213 - GATA TRANSCRIPTION FACTOR 3 Genomic Order:  1120
Name:  ? Phvul.002G112000 Secondary Identifier:  ? PAC:37174371
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G112000 0.5kb upstream 0.5kb upstream 2262 true Chr02: 24037055-24039316 Phaseolus vulgaris
Phvul.002G112000 0.5kb upstream 0.5kb upstream 500 false Chr02: 24038817-24039316 Phaseolus vulgaris
Phvul.002G112000 0.5kb downstream 0.5kb downstream 2262 true Chr02: 24036555-24038816 Phaseolus vulgaris
Phvul.002G112000 0.5kb downstream 0.5kb downstream 500 false Chr02: 24036555-24037054 Phaseolus vulgaris
Phvul.002G112000 1.0kb upstream 1.0kb upstream 2762 true Chr02: 24037055-24039816 Phaseolus vulgaris
Phvul.002G112000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24038817-24039816 Phaseolus vulgaris
Phvul.002G112000 1.0kb downstream 1.0kb downstream 2762 true Chr02: 24036055-24038816 Phaseolus vulgaris
Phvul.002G112000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24036055-24037054 Phaseolus vulgaris
Phvul.002G112000 2.0kb upstream 2.0kb upstream 3762 true Chr02: 24037055-24040816 Phaseolus vulgaris
Phvul.002G112000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24038817-24040816 Phaseolus vulgaris
Phvul.002G112000 2.0kb downstream 2.0kb downstream 3762 true Chr02: 24035055-24038816 Phaseolus vulgaris
Phvul.002G112000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24035055-24037054 Phaseolus vulgaris
Phvul.002G112000 5.0kb upstream 5.0kb upstream 6762 true Chr02: 24037055-24043816 Phaseolus vulgaris
Phvul.002G112000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24038817-24043816 Phaseolus vulgaris
Phvul.002G112000 5.0kb downstream 5.0kb downstream 6762 true Chr02: 24032055-24038816 Phaseolus vulgaris
Phvul.002G112000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24032055-24037054 Phaseolus vulgaris
Phvul.002G112000 10.0kb upstream 10.0kb upstream 11762 true Chr02: 24037055-24048816 Phaseolus vulgaris
Phvul.002G112000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24038817-24048816 Phaseolus vulgaris
Phvul.002G112000 10.0kb downstream 10.0kb downstream 11762 true Chr02: 24027055-24038816 Phaseolus vulgaris
Phvul.002G112000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24027055-24037054 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300215 5265 Fabidae View MSA
124070837 5270 Rosid View MSA
123749786 5271 Pentapetalae View MSA
122796021 5272 Eudicot View MSA
122049564 5273 Angiosperm View MSA
121349341 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.9046 0.0 17.0768    
cufflinks 10.1952 0.0 28.0971    
cufflinks 6.46607 0.0 18.6474    
cufflinks 4.31383 0.0 12.8475    
cufflinks 6.90323 0.0 19.5761    
cufflinks 16.9849 0.0 44.9275   High
cufflinks 5.00768 0.0 14.6593    
cufflinks 5.55218 0.0 16.1435    
cufflinks 4.75626 0.0 14.036    
cufflinks 3.76746 0.0 11.5008   Low
cufflinks 11.9751 0.0 32.4341   High

0 Strain