Gene : Phvul.002G097700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11353:SF99 - CHAPERONIN 60 SUBUNIT ALPHA 2, CHLOROPLASTIC Genomic Order:  992
Name:  ? Phvul.002G097700 Secondary Identifier:  ? PAC:37175058
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G097700 0.5kb upstream 0.5kb upstream 6781 true Chr02: 20070949-20077729 Phaseolus vulgaris
Phvul.002G097700 0.5kb upstream 0.5kb upstream 500 false Chr02: 20070949-20071448 Phaseolus vulgaris
Phvul.002G097700 0.5kb downstream 0.5kb downstream 6781 true Chr02: 20071449-20078229 Phaseolus vulgaris
Phvul.002G097700 0.5kb downstream 0.5kb downstream 500 false Chr02: 20077730-20078229 Phaseolus vulgaris
Phvul.002G097700 1.0kb upstream 1.0kb upstream 7281 true Chr02: 20070449-20077729 Phaseolus vulgaris
Phvul.002G097700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 20070449-20071448 Phaseolus vulgaris
Phvul.002G097700 1.0kb downstream 1.0kb downstream 7281 true Chr02: 20071449-20078729 Phaseolus vulgaris
Phvul.002G097700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 20077730-20078729 Phaseolus vulgaris
Phvul.002G097700 2.0kb upstream 2.0kb upstream 8281 true Chr02: 20069449-20077729 Phaseolus vulgaris
Phvul.002G097700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 20069449-20071448 Phaseolus vulgaris
Phvul.002G097700 2.0kb downstream 2.0kb downstream 8281 true Chr02: 20071449-20079729 Phaseolus vulgaris
Phvul.002G097700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 20077730-20079729 Phaseolus vulgaris
Phvul.002G097700 5.0kb upstream 5.0kb upstream 11281 true Chr02: 20066449-20077729 Phaseolus vulgaris
Phvul.002G097700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 20066449-20071448 Phaseolus vulgaris
Phvul.002G097700 5.0kb downstream 5.0kb downstream 11281 true Chr02: 20071449-20082729 Phaseolus vulgaris
Phvul.002G097700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 20077730-20082729 Phaseolus vulgaris
Phvul.002G097700 10.0kb upstream 10.0kb upstream 16281 true Chr02: 20061449-20077729 Phaseolus vulgaris
Phvul.002G097700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 20061449-20071448 Phaseolus vulgaris
Phvul.002G097700 10.0kb downstream 10.0kb downstream 16281 true Chr02: 20071449-20087729 Phaseolus vulgaris
Phvul.002G097700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 20077730-20087729 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302563 5265 Fabidae View MSA
124066772 5270 Rosid View MSA
123747305 5271 Pentapetalae View MSA
122795365 5272 Eudicot View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.48048 0.0 5.17199    
cufflinks 2.20203 0.0 7.0997   High
cufflinks 1.84877 0.0 6.1492    
cufflinks 1.02208 0.0 4.06961   Low
cufflinks 1.59046 0.0 5.55987    
cufflinks 2.41428 0.0 7.61017   High
cufflinks 1.63367 0.0 5.66587    
cufflinks 1.79017 0.0 7.88928    
cufflinks 1.81604 0.0 6.17887    
cufflinks 1.96507 0.0 6.53129    
cufflinks 1.81836 0.0 6.21232    

0 Strain