Gene : Phvul.002G100001 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11040:SF48 - ZINC TRANSPORTER 10-RELATED Genomic Order:  973
Name:  ? Phvul.002G100001 Secondary Identifier:  ? PAC:37178269
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G100001 0.5kb upstream 0.5kb upstream 2927 true Chr02: 19321798-19324724 Phaseolus vulgaris
Phvul.002G100001 0.5kb upstream 0.5kb upstream 500 false Chr02: 19324225-19324724 Phaseolus vulgaris
Phvul.002G100001 0.5kb downstream 0.5kb downstream 2927 true Chr02: 19321298-19324224 Phaseolus vulgaris
Phvul.002G100001 0.5kb downstream 0.5kb downstream 500 false Chr02: 19321298-19321797 Phaseolus vulgaris
Phvul.002G100001 1.0kb upstream 1.0kb upstream 3427 true Chr02: 19321798-19325224 Phaseolus vulgaris
Phvul.002G100001 1.0kb upstream 1.0kb upstream 1000 false Chr02: 19324225-19325224 Phaseolus vulgaris
Phvul.002G100001 1.0kb downstream 1.0kb downstream 3427 true Chr02: 19320798-19324224 Phaseolus vulgaris
Phvul.002G100001 1.0kb downstream 1.0kb downstream 1000 false Chr02: 19320798-19321797 Phaseolus vulgaris
Phvul.002G100001 2.0kb upstream 2.0kb upstream 4427 true Chr02: 19321798-19326224 Phaseolus vulgaris
Phvul.002G100001 2.0kb upstream 2.0kb upstream 2000 false Chr02: 19324225-19326224 Phaseolus vulgaris
Phvul.002G100001 2.0kb downstream 2.0kb downstream 4427 true Chr02: 19319798-19324224 Phaseolus vulgaris
Phvul.002G100001 2.0kb downstream 2.0kb downstream 2000 false Chr02: 19319798-19321797 Phaseolus vulgaris
Phvul.002G100001 5.0kb upstream 5.0kb upstream 7427 true Chr02: 19321798-19329224 Phaseolus vulgaris
Phvul.002G100001 5.0kb upstream 5.0kb upstream 5000 false Chr02: 19324225-19329224 Phaseolus vulgaris
Phvul.002G100001 5.0kb downstream 5.0kb downstream 7427 true Chr02: 19316798-19324224 Phaseolus vulgaris
Phvul.002G100001 5.0kb downstream 5.0kb downstream 5000 false Chr02: 19316798-19321797 Phaseolus vulgaris
Phvul.002G100001 10.0kb upstream 10.0kb upstream 12427 true Chr02: 19321798-19334224 Phaseolus vulgaris
Phvul.002G100001 10.0kb upstream 10.0kb upstream 10000 false Chr02: 19324225-19334224 Phaseolus vulgaris
Phvul.002G100001 10.0kb downstream 10.0kb downstream 12427 true Chr02: 19311798-19324224 Phaseolus vulgaris
Phvul.002G100001 10.0kb downstream 10.0kb downstream 10000 false Chr02: 19311798-19321797 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305267 5265 Fabidae View MSA
124068612 5270 Rosid View MSA
123743526 5271 Pentapetalae View MSA
122794110 5272 Eudicot View MSA
122043249 5273 Angiosperm View MSA
121310094 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.89023 0.0 6.31852    
cufflinks 2.45231 0.0 7.94122    
cufflinks 3.28788 0.0 10.2948    
cufflinks 0.606818 0.0 2.27112    
cufflinks 1.3397 0.0 4.65615    
cufflinks 13.7735 0.0 37.229   High
cufflinks 0.196117 0.0 0.800211 Low Low
cufflinks 0.0385788 0.0 0.183658 Low Low
cufflinks 0.86612 0.0 3.13622    
cufflinks 0.321035 0.0 1.26248 Low  
cufflinks 3.7049 0.0 11.4853    

0 Strain