Gene : Phvul.002G100700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR17985 - SER/THR-RICH PROTEIN T10 IN DGCR REGION Genomic Order:  1008
Name:  ? Phvul.002G100700 Secondary Identifier:  ? PAC:37176393
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G100700 0.5kb upstream 0.5kb upstream 2470 true Chr02: 21033886-21036355 Phaseolus vulgaris
Phvul.002G100700 0.5kb upstream 0.5kb upstream 500 false Chr02: 21035856-21036355 Phaseolus vulgaris
Phvul.002G100700 0.5kb downstream 0.5kb downstream 2470 true Chr02: 21033386-21035855 Phaseolus vulgaris
Phvul.002G100700 0.5kb downstream 0.5kb downstream 500 false Chr02: 21033386-21033885 Phaseolus vulgaris
Phvul.002G100700 1.0kb upstream 1.0kb upstream 2970 true Chr02: 21033886-21036855 Phaseolus vulgaris
Phvul.002G100700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 21035856-21036855 Phaseolus vulgaris
Phvul.002G100700 1.0kb downstream 1.0kb downstream 2970 true Chr02: 21032886-21035855 Phaseolus vulgaris
Phvul.002G100700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 21032886-21033885 Phaseolus vulgaris
Phvul.002G100700 2.0kb upstream 2.0kb upstream 3970 true Chr02: 21033886-21037855 Phaseolus vulgaris
Phvul.002G100700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 21035856-21037855 Phaseolus vulgaris
Phvul.002G100700 2.0kb downstream 2.0kb downstream 3970 true Chr02: 21031886-21035855 Phaseolus vulgaris
Phvul.002G100700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 21031886-21033885 Phaseolus vulgaris
Phvul.002G100700 5.0kb upstream 5.0kb upstream 6970 true Chr02: 21033886-21040855 Phaseolus vulgaris
Phvul.002G100700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 21035856-21040855 Phaseolus vulgaris
Phvul.002G100700 5.0kb downstream 5.0kb downstream 6970 true Chr02: 21028886-21035855 Phaseolus vulgaris
Phvul.002G100700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 21028886-21033885 Phaseolus vulgaris
Phvul.002G100700 10.0kb upstream 10.0kb upstream 11970 true Chr02: 21033886-21045855 Phaseolus vulgaris
Phvul.002G100700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 21035856-21045855 Phaseolus vulgaris
Phvul.002G100700 10.0kb downstream 10.0kb downstream 11970 true Chr02: 21023886-21035855 Phaseolus vulgaris
Phvul.002G100700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 21023886-21033885 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312617 5265 Fabidae View MSA
124064404 5270 Rosid View MSA
123753497 5271 Pentapetalae View MSA
122790502 5272 Eudicot View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.85251 0.0 6.2531    
cufflinks 3.88889 0.0 12.0665   High
cufflinks 1.00922 0.0 3.62727   Low
cufflinks 3.77027 0.0 11.7826   High
cufflinks 1.88417 0.0 6.36374    
cufflinks 2.12841 0.0 7.0613    
cufflinks 2.41632 0.0 7.8734    
cufflinks 2.39516 0.0 7.81016    
cufflinks 2.39527 0.0 7.83518    
cufflinks 2.92703 0.0 9.37184    
cufflinks 2.05618 0.0 6.8647    

0 Strain