Gene : Phvul.002G100800 P. vulgaris v2.1
Defline:  (1 of 72) PF02362 - B3 DNA binding domain (B3) Genomic Order:  1009
Name:  ? Phvul.002G100800 Secondary Identifier:  ? PAC:37175773
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G100800 0.5kb upstream 0.5kb upstream 3203 true Chr02: 21044586-21047788 Phaseolus vulgaris
Phvul.002G100800 0.5kb upstream 0.5kb upstream 500 false Chr02: 21044586-21045085 Phaseolus vulgaris
Phvul.002G100800 0.5kb downstream 0.5kb downstream 3203 true Chr02: 21045086-21048288 Phaseolus vulgaris
Phvul.002G100800 0.5kb downstream 0.5kb downstream 500 false Chr02: 21047789-21048288 Phaseolus vulgaris
Phvul.002G100800 1.0kb upstream 1.0kb upstream 3703 true Chr02: 21044086-21047788 Phaseolus vulgaris
Phvul.002G100800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 21044086-21045085 Phaseolus vulgaris
Phvul.002G100800 1.0kb downstream 1.0kb downstream 3703 true Chr02: 21045086-21048788 Phaseolus vulgaris
Phvul.002G100800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 21047789-21048788 Phaseolus vulgaris
Phvul.002G100800 2.0kb upstream 2.0kb upstream 4703 true Chr02: 21043086-21047788 Phaseolus vulgaris
Phvul.002G100800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 21043086-21045085 Phaseolus vulgaris
Phvul.002G100800 2.0kb downstream 2.0kb downstream 4703 true Chr02: 21045086-21049788 Phaseolus vulgaris
Phvul.002G100800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 21047789-21049788 Phaseolus vulgaris
Phvul.002G100800 5.0kb upstream 5.0kb upstream 7703 true Chr02: 21040086-21047788 Phaseolus vulgaris
Phvul.002G100800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 21040086-21045085 Phaseolus vulgaris
Phvul.002G100800 5.0kb downstream 5.0kb downstream 7703 true Chr02: 21045086-21052788 Phaseolus vulgaris
Phvul.002G100800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 21047789-21052788 Phaseolus vulgaris
Phvul.002G100800 10.0kb upstream 10.0kb upstream 12703 true Chr02: 21035086-21047788 Phaseolus vulgaris
Phvul.002G100800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 21035086-21045085 Phaseolus vulgaris
Phvul.002G100800 10.0kb downstream 10.0kb downstream 12703 true Chr02: 21045086-21057788 Phaseolus vulgaris
Phvul.002G100800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 21047789-21057788 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308155 5265 Fabidae View MSA
124070911 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.308521 0.0 1.28513 Low  
cufflinks 0.726045 0.0 5.13851    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.31365 0.0 8.2498   High
cufflinks 0.539035 0.0 2.15269 Low  
cufflinks 0.717812 0.0 6.32039    
cufflinks 0.166845 0.0 0.734683 Low  
cufflinks 0.0802142 0.0 0.398511 Low Low
cufflinks 0.244896 0.0 1.03843 Low  
cufflinks 0.221426 0.0 0.954187 Low  
cufflinks 0.741835 0.0 5.25084    

0 Strain