Gene : Phvul.002G101200 P. vulgaris v2.1
Defline:  (1 of 6) K17604 - zinc finger SWIM domain-containing protein 3 (ZSWIM3) Genomic Order:  1013
Name:  ? Phvul.002G101200 Secondary Identifier:  ? PAC:37175900
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G101200 0.5kb upstream 0.5kb upstream 5499 true Chr02: 21120316-21125814 Phaseolus vulgaris
Phvul.002G101200 0.5kb upstream 0.5kb upstream 500 false Chr02: 21120316-21120815 Phaseolus vulgaris
Phvul.002G101200 0.5kb downstream 0.5kb downstream 5499 true Chr02: 21120816-21126314 Phaseolus vulgaris
Phvul.002G101200 0.5kb downstream 0.5kb downstream 500 false Chr02: 21125815-21126314 Phaseolus vulgaris
Phvul.002G101200 1.0kb upstream 1.0kb upstream 5999 true Chr02: 21119816-21125814 Phaseolus vulgaris
Phvul.002G101200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 21119816-21120815 Phaseolus vulgaris
Phvul.002G101200 1.0kb downstream 1.0kb downstream 5999 true Chr02: 21120816-21126814 Phaseolus vulgaris
Phvul.002G101200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 21125815-21126814 Phaseolus vulgaris
Phvul.002G101200 2.0kb upstream 2.0kb upstream 6999 true Chr02: 21118816-21125814 Phaseolus vulgaris
Phvul.002G101200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 21118816-21120815 Phaseolus vulgaris
Phvul.002G101200 2.0kb downstream 2.0kb downstream 6999 true Chr02: 21120816-21127814 Phaseolus vulgaris
Phvul.002G101200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 21125815-21127814 Phaseolus vulgaris
Phvul.002G101200 5.0kb upstream 5.0kb upstream 9999 true Chr02: 21115816-21125814 Phaseolus vulgaris
Phvul.002G101200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 21115816-21120815 Phaseolus vulgaris
Phvul.002G101200 5.0kb downstream 5.0kb downstream 9999 true Chr02: 21120816-21130814 Phaseolus vulgaris
Phvul.002G101200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 21125815-21130814 Phaseolus vulgaris
Phvul.002G101200 10.0kb upstream 10.0kb upstream 14999 true Chr02: 21110816-21125814 Phaseolus vulgaris
Phvul.002G101200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 21110816-21120815 Phaseolus vulgaris
Phvul.002G101200 10.0kb downstream 10.0kb downstream 14999 true Chr02: 21120816-21135814 Phaseolus vulgaris
Phvul.002G101200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 21125815-21135814 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303647 5265 Fabidae View MSA
124074797 5270 Rosid View MSA
123752010 5271 Pentapetalae View MSA
122794542 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.41315 0.0 1.52386 Low Low
cufflinks 0.98402 0.0 3.33597    
cufflinks 0.749406 0.0 2.6037    
cufflinks 0.551435 0.0 2.00198 Low  
cufflinks 0.793476 0.0 2.78248    
cufflinks 1.18591 0.0 3.93442    
cufflinks 1.45435 0.0 4.71829    
cufflinks 1.87779 0.0 5.88386   High
cufflinks 1.3058 0.0 4.29324    
cufflinks 1.27982 0.0 4.2202    
cufflinks 0.444812 0.0 1.64194 Low Low

0 Strain