Gene : Phvul.002G101300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11817:SF5 - PYRUVATE KINASE-RELATED Genomic Order:  1014
Name:  ? Phvul.002G101300 Secondary Identifier:  ? PAC:37178340
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-1042 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5723 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G101300 0.5kb upstream 0.5kb upstream 4211 true Chr02: 21134542-21138752 Phaseolus vulgaris
Phvul.002G101300 0.5kb upstream 0.5kb upstream 500 false Chr02: 21134542-21135041 Phaseolus vulgaris
Phvul.002G101300 0.5kb downstream 0.5kb downstream 4211 true Chr02: 21135042-21139252 Phaseolus vulgaris
Phvul.002G101300 0.5kb downstream 0.5kb downstream 500 false Chr02: 21138753-21139252 Phaseolus vulgaris
Phvul.002G101300 1.0kb upstream 1.0kb upstream 4711 true Chr02: 21134042-21138752 Phaseolus vulgaris
Phvul.002G101300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 21134042-21135041 Phaseolus vulgaris
Phvul.002G101300 1.0kb downstream 1.0kb downstream 4711 true Chr02: 21135042-21139752 Phaseolus vulgaris
Phvul.002G101300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 21138753-21139752 Phaseolus vulgaris
Phvul.002G101300 2.0kb upstream 2.0kb upstream 5711 true Chr02: 21133042-21138752 Phaseolus vulgaris
Phvul.002G101300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 21133042-21135041 Phaseolus vulgaris
Phvul.002G101300 2.0kb downstream 2.0kb downstream 5711 true Chr02: 21135042-21140752 Phaseolus vulgaris
Phvul.002G101300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 21138753-21140752 Phaseolus vulgaris
Phvul.002G101300 5.0kb upstream 5.0kb upstream 8711 true Chr02: 21130042-21138752 Phaseolus vulgaris
Phvul.002G101300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 21130042-21135041 Phaseolus vulgaris
Phvul.002G101300 5.0kb downstream 5.0kb downstream 8711 true Chr02: 21135042-21143752 Phaseolus vulgaris
Phvul.002G101300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 21138753-21143752 Phaseolus vulgaris
Phvul.002G101300 10.0kb upstream 10.0kb upstream 13711 true Chr02: 21125042-21138752 Phaseolus vulgaris
Phvul.002G101300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 21125042-21135041 Phaseolus vulgaris
Phvul.002G101300 10.0kb downstream 10.0kb downstream 13711 true Chr02: 21135042-21148752 Phaseolus vulgaris
Phvul.002G101300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 21138753-21148752 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301531 5265 Fabidae View MSA
124068384 5270 Rosid View MSA
123737970 5271 Pentapetalae View MSA
122792873 5272 Eudicot View MSA
122044181 5273 Angiosperm View MSA
121310247 5274 Embryophyte View MSA
123427047 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.2346 0.0 132.059 High  
cufflinks 41.1632 0.0 108.812 High  
cufflinks 31.4002 0.0 81.8561   Low
cufflinks 110.575 0.0 321.77 High High
cufflinks 46.7996 0.0 124.687 High  
cufflinks 34.3027 0.0 89.7748 High  
cufflinks 48.0426 0.0 128.811 High  
cufflinks 33.9321 0.0 88.9064 High  
cufflinks 79.8187 0.0 224.474 High High
cufflinks 49.8799 0.0 133.679 High  
cufflinks 54.5748 0.0 147.203 High  

0 Strain