Gene : Phvul.002G104600 P. vulgaris v2.1
Defline:  (1 of 5) PF01641 - SelR domain (SelR) Genomic Order:  1047
Name:  ? Phvul.002G104600 Secondary Identifier:  ? PAC:37177029
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G104600 0.5kb upstream 0.5kb upstream 1233 true Chr02: 22282852-22284084 Phaseolus vulgaris
Phvul.002G104600 0.5kb upstream 0.5kb upstream 500 false Chr02: 22282852-22283351 Phaseolus vulgaris
Phvul.002G104600 0.5kb downstream 0.5kb downstream 1233 true Chr02: 22283352-22284584 Phaseolus vulgaris
Phvul.002G104600 0.5kb downstream 0.5kb downstream 500 false Chr02: 22284085-22284584 Phaseolus vulgaris
Phvul.002G104600 1.0kb upstream 1.0kb upstream 1733 true Chr02: 22282352-22284084 Phaseolus vulgaris
Phvul.002G104600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 22282352-22283351 Phaseolus vulgaris
Phvul.002G104600 1.0kb downstream 1.0kb downstream 1733 true Chr02: 22283352-22285084 Phaseolus vulgaris
Phvul.002G104600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 22284085-22285084 Phaseolus vulgaris
Phvul.002G104600 2.0kb upstream 2.0kb upstream 2733 true Chr02: 22281352-22284084 Phaseolus vulgaris
Phvul.002G104600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 22281352-22283351 Phaseolus vulgaris
Phvul.002G104600 2.0kb downstream 2.0kb downstream 2733 true Chr02: 22283352-22286084 Phaseolus vulgaris
Phvul.002G104600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 22284085-22286084 Phaseolus vulgaris
Phvul.002G104600 5.0kb upstream 5.0kb upstream 5733 true Chr02: 22278352-22284084 Phaseolus vulgaris
Phvul.002G104600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 22278352-22283351 Phaseolus vulgaris
Phvul.002G104600 5.0kb downstream 5.0kb downstream 5733 true Chr02: 22283352-22289084 Phaseolus vulgaris
Phvul.002G104600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 22284085-22289084 Phaseolus vulgaris
Phvul.002G104600 10.0kb upstream 10.0kb upstream 10733 true Chr02: 22273352-22284084 Phaseolus vulgaris
Phvul.002G104600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 22273352-22283351 Phaseolus vulgaris
Phvul.002G104600 10.0kb downstream 10.0kb downstream 10733 true Chr02: 22283352-22294084 Phaseolus vulgaris
Phvul.002G104600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 22284085-22294084 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304121 5265 Fabidae View MSA
124065245 5270 Rosid View MSA
123748532 5271 Pentapetalae View MSA
122792835 5272 Eudicot View MSA
122046009 5273 Angiosperm View MSA
121345994 5274 Embryophyte View MSA
123380304 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4995 0.0 31.0929    
cufflinks 7.39882 0.0 22.9947    
cufflinks 3.17574 0.0 10.8358   Low
cufflinks 7.42943 0.0 22.7541    
cufflinks 9.64935 0.0 28.8044    
cufflinks 3.62255 0.0 12.1725   Low
cufflinks 10.7014 0.0 31.5877    
cufflinks 6.87326 0.0 21.5366    
cufflinks 6.5045 0.0 20.3411    
cufflinks 14.0543 0.0 40.6329   High
cufflinks 11.2583 0.0 33.2614    

0 Strain