Gene : Phvul.002G090511 P. vulgaris v2.1
Defline:  (1 of 1) K02963 - small subunit ribosomal protein S18 (RP-S18, MRPS18, rpsR) Genomic Order:  900
Name:  ? Phvul.002G090511 Secondary Identifier:  ? PAC:37178102
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G090511 0.5kb upstream 0.5kb upstream 809 true Chr02: 15664342-15665150 Phaseolus vulgaris
Phvul.002G090511 0.5kb upstream 0.5kb upstream 500 false Chr02: 15664651-15665150 Phaseolus vulgaris
Phvul.002G090511 0.5kb downstream 0.5kb downstream 809 true Chr02: 15663842-15664650 Phaseolus vulgaris
Phvul.002G090511 0.5kb downstream 0.5kb downstream 500 false Chr02: 15663842-15664341 Phaseolus vulgaris
Phvul.002G090511 1.0kb upstream 1.0kb upstream 1309 true Chr02: 15664342-15665650 Phaseolus vulgaris
Phvul.002G090511 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15664651-15665650 Phaseolus vulgaris
Phvul.002G090511 1.0kb downstream 1.0kb downstream 1309 true Chr02: 15663342-15664650 Phaseolus vulgaris
Phvul.002G090511 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15663342-15664341 Phaseolus vulgaris
Phvul.002G090511 2.0kb upstream 2.0kb upstream 2309 true Chr02: 15664342-15666650 Phaseolus vulgaris
Phvul.002G090511 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15664651-15666650 Phaseolus vulgaris
Phvul.002G090511 2.0kb downstream 2.0kb downstream 2309 true Chr02: 15662342-15664650 Phaseolus vulgaris
Phvul.002G090511 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15662342-15664341 Phaseolus vulgaris
Phvul.002G090511 5.0kb upstream 5.0kb upstream 5309 true Chr02: 15664342-15669650 Phaseolus vulgaris
Phvul.002G090511 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15664651-15669650 Phaseolus vulgaris
Phvul.002G090511 5.0kb downstream 5.0kb downstream 5309 true Chr02: 15659342-15664650 Phaseolus vulgaris
Phvul.002G090511 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15659342-15664341 Phaseolus vulgaris
Phvul.002G090511 10.0kb upstream 10.0kb upstream 10309 true Chr02: 15664342-15674650 Phaseolus vulgaris
Phvul.002G090511 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15664651-15674650 Phaseolus vulgaris
Phvul.002G090511 10.0kb downstream 10.0kb downstream 10309 true Chr02: 15654342-15664650 Phaseolus vulgaris
Phvul.002G090511 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15654342-15664341 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028985 5273 Angiosperm View MSA
122254668 5265 Fabidae View MSA
124037325 5270 Rosid View MSA
123748932 5271 Pentapetalae View MSA
122795855 5272 Eudicot View MSA
121351614 5274 Embryophyte View MSA
123382248 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.327119 0.0 1.6212 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.87444 0.0 33.3489   High
cufflinks 3.47316 0.0 13.9246    
cufflinks 1.88091 0.0 7.93266    
cufflinks 3.29883 0.0 13.4056    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.01824 0.0 4.58606    
cufflinks 0.519738 0.0 2.52445    
cufflinks 0.638194 0.0 3.01514    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain