Gene : Phvul.002G090544 P. vulgaris v2.1
Defline:  (1 of 1) K02708 - photosystem II cytochrome b559 subunit beta (psbF) Genomic Order:  903
Name:  ? Phvul.002G090544 Secondary Identifier:  ? PAC:37176157
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G090544 0.5kb upstream 0.5kb upstream 708 true Chr02: 15668025-15668732 Phaseolus vulgaris
Phvul.002G090544 0.5kb upstream 0.5kb upstream 500 false Chr02: 15668025-15668524 Phaseolus vulgaris
Phvul.002G090544 0.5kb downstream 0.5kb downstream 708 true Chr02: 15668525-15669232 Phaseolus vulgaris
Phvul.002G090544 0.5kb downstream 0.5kb downstream 500 false Chr02: 15668733-15669232 Phaseolus vulgaris
Phvul.002G090544 1.0kb upstream 1.0kb upstream 1208 true Chr02: 15667525-15668732 Phaseolus vulgaris
Phvul.002G090544 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15667525-15668524 Phaseolus vulgaris
Phvul.002G090544 1.0kb downstream 1.0kb downstream 1208 true Chr02: 15668525-15669732 Phaseolus vulgaris
Phvul.002G090544 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15668733-15669732 Phaseolus vulgaris
Phvul.002G090544 2.0kb upstream 2.0kb upstream 2208 true Chr02: 15666525-15668732 Phaseolus vulgaris
Phvul.002G090544 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15666525-15668524 Phaseolus vulgaris
Phvul.002G090544 2.0kb downstream 2.0kb downstream 2208 true Chr02: 15668525-15670732 Phaseolus vulgaris
Phvul.002G090544 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15668733-15670732 Phaseolus vulgaris
Phvul.002G090544 5.0kb upstream 5.0kb upstream 5208 true Chr02: 15663525-15668732 Phaseolus vulgaris
Phvul.002G090544 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15663525-15668524 Phaseolus vulgaris
Phvul.002G090544 5.0kb downstream 5.0kb downstream 5208 true Chr02: 15668525-15673732 Phaseolus vulgaris
Phvul.002G090544 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15668733-15673732 Phaseolus vulgaris
Phvul.002G090544 10.0kb upstream 10.0kb upstream 10208 true Chr02: 15658525-15668732 Phaseolus vulgaris
Phvul.002G090544 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15658525-15668524 Phaseolus vulgaris
Phvul.002G090544 10.0kb downstream 10.0kb downstream 10208 true Chr02: 15668525-15678732 Phaseolus vulgaris
Phvul.002G090544 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15668733-15678732 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029655 5273 Angiosperm View MSA
122251148 5265 Fabidae Singleton cluster - no MSA
124039912 5270 Rosid View MSA
123744825 5271 Pentapetalae View MSA
122771261 5272 Eudicot View MSA
123429025 5275 Viridiplantae View MSA
121298959 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.77586 0.0 35.7914    
cufflinks 3.9818 0.0 19.8876   Low
cufflinks 250.676 0.0 852.456 High High
cufflinks 25.2539 0.0 103.058    
cufflinks 8.13626 0.0 38.2043    
cufflinks 97.5306 0.0 365.053 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 11.1936 0.0 50.1948    
cufflinks 8.98186 0.0 41.3811    

0 Strain