Gene : Phvul.002G092600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Genomic Order:  927
Name:  ? Phvul.002G092600 Secondary Identifier:  ? PAC:37175221
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G092600 0.5kb upstream 0.5kb upstream 3846 true Chr02: 16923378-16927223 Phaseolus vulgaris
Phvul.002G092600 0.5kb upstream 0.5kb upstream 500 false Chr02: 16923378-16923877 Phaseolus vulgaris
Phvul.002G092600 0.5kb downstream 0.5kb downstream 3846 true Chr02: 16923878-16927723 Phaseolus vulgaris
Phvul.002G092600 0.5kb downstream 0.5kb downstream 500 false Chr02: 16927224-16927723 Phaseolus vulgaris
Phvul.002G092600 1.0kb upstream 1.0kb upstream 4346 true Chr02: 16922878-16927223 Phaseolus vulgaris
Phvul.002G092600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16922878-16923877 Phaseolus vulgaris
Phvul.002G092600 1.0kb downstream 1.0kb downstream 4346 true Chr02: 16923878-16928223 Phaseolus vulgaris
Phvul.002G092600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16927224-16928223 Phaseolus vulgaris
Phvul.002G092600 2.0kb upstream 2.0kb upstream 5346 true Chr02: 16921878-16927223 Phaseolus vulgaris
Phvul.002G092600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16921878-16923877 Phaseolus vulgaris
Phvul.002G092600 2.0kb downstream 2.0kb downstream 5346 true Chr02: 16923878-16929223 Phaseolus vulgaris
Phvul.002G092600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16927224-16929223 Phaseolus vulgaris
Phvul.002G092600 5.0kb upstream 5.0kb upstream 8346 true Chr02: 16918878-16927223 Phaseolus vulgaris
Phvul.002G092600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16918878-16923877 Phaseolus vulgaris
Phvul.002G092600 5.0kb downstream 5.0kb downstream 8346 true Chr02: 16923878-16932223 Phaseolus vulgaris
Phvul.002G092600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16927224-16932223 Phaseolus vulgaris
Phvul.002G092600 10.0kb upstream 10.0kb upstream 13346 true Chr02: 16913878-16927223 Phaseolus vulgaris
Phvul.002G092600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16913878-16923877 Phaseolus vulgaris
Phvul.002G092600 10.0kb downstream 10.0kb downstream 13346 true Chr02: 16923878-16937223 Phaseolus vulgaris
Phvul.002G092600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16927224-16937223 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306728 5265 Fabidae View MSA
124062819 5270 Rosid View MSA
123743592 5271 Pentapetalae View MSA
122789387 5272 Eudicot View MSA
122050659 5273 Angiosperm View MSA
121312051 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.14911 0.0 9.15295   Low
cufflinks 7.92074 0.0 21.168    
cufflinks 11.2919 0.0 29.4937    
cufflinks 6.16248 0.0 16.8511    
cufflinks 11.2476 0.0 29.4877    
cufflinks 15.54 0.0 40.2253   High
cufflinks 9.81805 0.0 25.825    
cufflinks 9.5292 0.0 25.0734    
cufflinks 11.7488 0.0 30.6354    
cufflinks 6.39087 0.0 17.3914    
cufflinks 10.6537 0.0 27.9889    

0 Strain