Gene : Phvul.002G091700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31741:SF3 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  918
Name:  ? Phvul.002G091700 Secondary Identifier:  ? PAC:37175329
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G091700 0.5kb upstream 0.5kb upstream 6371 true Chr02: 16136318-16142688 Phaseolus vulgaris
Phvul.002G091700 0.5kb upstream 0.5kb upstream 500 false Chr02: 16142189-16142688 Phaseolus vulgaris
Phvul.002G091700 0.5kb downstream 0.5kb downstream 6371 true Chr02: 16135818-16142188 Phaseolus vulgaris
Phvul.002G091700 0.5kb downstream 0.5kb downstream 500 false Chr02: 16135818-16136317 Phaseolus vulgaris
Phvul.002G091700 1.0kb upstream 1.0kb upstream 6871 true Chr02: 16136318-16143188 Phaseolus vulgaris
Phvul.002G091700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16142189-16143188 Phaseolus vulgaris
Phvul.002G091700 1.0kb downstream 1.0kb downstream 6871 true Chr02: 16135318-16142188 Phaseolus vulgaris
Phvul.002G091700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16135318-16136317 Phaseolus vulgaris
Phvul.002G091700 2.0kb upstream 2.0kb upstream 7871 true Chr02: 16136318-16144188 Phaseolus vulgaris
Phvul.002G091700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16142189-16144188 Phaseolus vulgaris
Phvul.002G091700 2.0kb downstream 2.0kb downstream 7871 true Chr02: 16134318-16142188 Phaseolus vulgaris
Phvul.002G091700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16134318-16136317 Phaseolus vulgaris
Phvul.002G091700 5.0kb upstream 5.0kb upstream 10871 true Chr02: 16136318-16147188 Phaseolus vulgaris
Phvul.002G091700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16142189-16147188 Phaseolus vulgaris
Phvul.002G091700 5.0kb downstream 5.0kb downstream 10871 true Chr02: 16131318-16142188 Phaseolus vulgaris
Phvul.002G091700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16131318-16136317 Phaseolus vulgaris
Phvul.002G091700 10.0kb upstream 10.0kb upstream 15871 true Chr02: 16136318-16152188 Phaseolus vulgaris
Phvul.002G091700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16142189-16152188 Phaseolus vulgaris
Phvul.002G091700 10.0kb downstream 10.0kb downstream 15871 true Chr02: 16126318-16142188 Phaseolus vulgaris
Phvul.002G091700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16126318-16136317 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310707 5265 Fabidae View MSA
124072479 5270 Rosid View MSA
123747295 5271 Pentapetalae View MSA
122788549 5272 Eudicot View MSA
122046099 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.25075 0.0 6.83708   Low
cufflinks 4.45098 0.0 12.5781   High
cufflinks 4.52284 0.0 12.7376   High
cufflinks 3.1938 0.0 9.45019    
cufflinks 2.93623 0.0 8.74708    
cufflinks 3.97327 0.0 11.3423    
cufflinks 2.88181 0.0 8.53328    
cufflinks 3.20984 0.0 9.33655    
cufflinks 3.03737 0.0 8.98165    
cufflinks 3.66881 0.0 10.5788    
cufflinks 3.63158 0.0 10.5367    

0 Strain