Gene : Phvul.002G094100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24326:SF114 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17-RELATED Genomic Order:  941
Name:  ? Phvul.002G094100 Secondary Identifier:  ? PAC:37175204
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G094100 0.5kb upstream 0.5kb upstream 3890 true Chr02: 17390248-17394137 Phaseolus vulgaris
Phvul.002G094100 0.5kb upstream 0.5kb upstream 500 false Chr02: 17393638-17394137 Phaseolus vulgaris
Phvul.002G094100 0.5kb downstream 0.5kb downstream 3890 true Chr02: 17389748-17393637 Phaseolus vulgaris
Phvul.002G094100 0.5kb downstream 0.5kb downstream 500 false Chr02: 17389748-17390247 Phaseolus vulgaris
Phvul.002G094100 1.0kb upstream 1.0kb upstream 4390 true Chr02: 17390248-17394637 Phaseolus vulgaris
Phvul.002G094100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 17393638-17394637 Phaseolus vulgaris
Phvul.002G094100 1.0kb downstream 1.0kb downstream 4390 true Chr02: 17389248-17393637 Phaseolus vulgaris
Phvul.002G094100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 17389248-17390247 Phaseolus vulgaris
Phvul.002G094100 2.0kb upstream 2.0kb upstream 5390 true Chr02: 17390248-17395637 Phaseolus vulgaris
Phvul.002G094100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 17393638-17395637 Phaseolus vulgaris
Phvul.002G094100 2.0kb downstream 2.0kb downstream 5390 true Chr02: 17388248-17393637 Phaseolus vulgaris
Phvul.002G094100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 17388248-17390247 Phaseolus vulgaris
Phvul.002G094100 5.0kb upstream 5.0kb upstream 8390 true Chr02: 17390248-17398637 Phaseolus vulgaris
Phvul.002G094100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 17393638-17398637 Phaseolus vulgaris
Phvul.002G094100 5.0kb downstream 5.0kb downstream 8390 true Chr02: 17385248-17393637 Phaseolus vulgaris
Phvul.002G094100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 17385248-17390247 Phaseolus vulgaris
Phvul.002G094100 10.0kb upstream 10.0kb upstream 13390 true Chr02: 17390248-17403637 Phaseolus vulgaris
Phvul.002G094100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 17393638-17403637 Phaseolus vulgaris
Phvul.002G094100 10.0kb downstream 10.0kb downstream 13390 true Chr02: 17380248-17393637 Phaseolus vulgaris
Phvul.002G094100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 17380248-17390247 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299097 5265 Fabidae View MSA
124067760 5270 Rosid View MSA
123739318 5271 Pentapetalae View MSA
122797113 5272 Eudicot View MSA
122043928 5273 Angiosperm View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.52147 0.0 5.31714    
cufflinks 3.15313 0.0 10.1531   High
cufflinks 0.392437 0.0 1.53903 Low Low
cufflinks 0.229402 0.0 0.936159 Low Low
cufflinks 2.5351 0.0 8.37696    
cufflinks 0.626219 0.0 2.36807    
cufflinks 2.40932 0.0 7.89866    
cufflinks 0.670948 0.0 2.5147    
cufflinks 0.678343 0.0 2.52989    
cufflinks 3.28749 0.0 10.6023   High
cufflinks 3.28966 0.0 10.5212   High

0 Strain