Gene : Phvul.002G078200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13561:SF20 - MUTAGEN-SENSITIVE 101 Genomic Order:  786
Name:  ? Phvul.002G078200 Secondary Identifier:  ? PAC:37178255
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G078200 0.5kb upstream 0.5kb upstream 22068 true Chr02: 12087632-12109699 Phaseolus vulgaris
Phvul.002G078200 0.5kb upstream 0.5kb upstream 500 false Chr02: 12109200-12109699 Phaseolus vulgaris
Phvul.002G078200 0.5kb downstream 0.5kb downstream 22068 true Chr02: 12087132-12109199 Phaseolus vulgaris
Phvul.002G078200 0.5kb downstream 0.5kb downstream 500 false Chr02: 12087132-12087631 Phaseolus vulgaris
Phvul.002G078200 1.0kb upstream 1.0kb upstream 22568 true Chr02: 12087632-12110199 Phaseolus vulgaris
Phvul.002G078200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12109200-12110199 Phaseolus vulgaris
Phvul.002G078200 1.0kb downstream 1.0kb downstream 22568 true Chr02: 12086632-12109199 Phaseolus vulgaris
Phvul.002G078200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12086632-12087631 Phaseolus vulgaris
Phvul.002G078200 2.0kb upstream 2.0kb upstream 23568 true Chr02: 12087632-12111199 Phaseolus vulgaris
Phvul.002G078200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12109200-12111199 Phaseolus vulgaris
Phvul.002G078200 2.0kb downstream 2.0kb downstream 23568 true Chr02: 12085632-12109199 Phaseolus vulgaris
Phvul.002G078200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12085632-12087631 Phaseolus vulgaris
Phvul.002G078200 5.0kb upstream 5.0kb upstream 26568 true Chr02: 12087632-12114199 Phaseolus vulgaris
Phvul.002G078200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12109200-12114199 Phaseolus vulgaris
Phvul.002G078200 5.0kb downstream 5.0kb downstream 26568 true Chr02: 12082632-12109199 Phaseolus vulgaris
Phvul.002G078200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12082632-12087631 Phaseolus vulgaris
Phvul.002G078200 10.0kb upstream 10.0kb upstream 31568 true Chr02: 12087632-12119199 Phaseolus vulgaris
Phvul.002G078200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12109200-12119199 Phaseolus vulgaris
Phvul.002G078200 10.0kb downstream 10.0kb downstream 31568 true Chr02: 12077632-12109199 Phaseolus vulgaris
Phvul.002G078200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12077632-12087631 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306389 5265 Fabidae View MSA
124067352 5270 Rosid View MSA
123739984 5271 Pentapetalae View MSA
122791325 5272 Eudicot View MSA
122043112 5273 Angiosperm View MSA
121348037 5274 Embryophyte View MSA
123425629 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.03983 0.0 9.29057    
cufflinks 2.25948 0.0 13.857    
cufflinks 2.40866 0.0 12.888    
cufflinks 0.714938 0.0 3.35489   Low
cufflinks 1.43651 0.0 6.6097    
cufflinks 2.79296 0.0 17.5202    
cufflinks 2.59441 0.0 18.7987    
cufflinks 3.0635 0.0 13.9144   High
cufflinks 1.52753 0.0 10.8673    
cufflinks 2.15077 0.0 13.2757    
cufflinks 1.48303 0.0 6.68738    

0 Strain