Gene : Phvul.002G077600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11516//PTHR11516:SF38 - PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR // SUBFAMILY NOT NAMED Genomic Order:  779
Name:  ? Phvul.002G077600 Secondary Identifier:  ? PAC:37174579
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5173 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PYRUVDEHYD-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G077600 0.5kb upstream 0.5kb upstream 7176 true Chr02: 11928817-11935992 Phaseolus vulgaris
Phvul.002G077600 0.5kb upstream 0.5kb upstream 500 false Chr02: 11935493-11935992 Phaseolus vulgaris
Phvul.002G077600 0.5kb downstream 0.5kb downstream 7176 true Chr02: 11928317-11935492 Phaseolus vulgaris
Phvul.002G077600 0.5kb downstream 0.5kb downstream 500 false Chr02: 11928317-11928816 Phaseolus vulgaris
Phvul.002G077600 1.0kb upstream 1.0kb upstream 7676 true Chr02: 11928817-11936492 Phaseolus vulgaris
Phvul.002G077600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11935493-11936492 Phaseolus vulgaris
Phvul.002G077600 1.0kb downstream 1.0kb downstream 7676 true Chr02: 11927817-11935492 Phaseolus vulgaris
Phvul.002G077600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11927817-11928816 Phaseolus vulgaris
Phvul.002G077600 2.0kb upstream 2.0kb upstream 8676 true Chr02: 11928817-11937492 Phaseolus vulgaris
Phvul.002G077600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11935493-11937492 Phaseolus vulgaris
Phvul.002G077600 2.0kb downstream 2.0kb downstream 8676 true Chr02: 11926817-11935492 Phaseolus vulgaris
Phvul.002G077600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11926817-11928816 Phaseolus vulgaris
Phvul.002G077600 5.0kb upstream 5.0kb upstream 11676 true Chr02: 11928817-11940492 Phaseolus vulgaris
Phvul.002G077600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11935493-11940492 Phaseolus vulgaris
Phvul.002G077600 5.0kb downstream 5.0kb downstream 11676 true Chr02: 11923817-11935492 Phaseolus vulgaris
Phvul.002G077600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11923817-11928816 Phaseolus vulgaris
Phvul.002G077600 10.0kb upstream 10.0kb upstream 16676 true Chr02: 11928817-11945492 Phaseolus vulgaris
Phvul.002G077600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11935493-11945492 Phaseolus vulgaris
Phvul.002G077600 10.0kb downstream 10.0kb downstream 16676 true Chr02: 11918817-11935492 Phaseolus vulgaris
Phvul.002G077600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11918817-11928816 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311865 5265 Fabidae View MSA
124066466 5270 Rosid View MSA
123744027 5271 Pentapetalae View MSA
122788942 5272 Eudicot View MSA
122045712 5273 Angiosperm View MSA
121344698 5274 Embryophyte View MSA
123425832 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 83.8426 0.0 233.034 High  
cufflinks 89.8449 0.0 251.689 High  
cufflinks 75.0513 0.0 205.462 High  
cufflinks 182.98 0.0 564.761 High High
cufflinks 109.927 0.0 315.761 High  
cufflinks 58.2893 0.0 156.478 High Low
cufflinks 75.2283 0.0 208.053 High  
cufflinks 66.6284 0.0 181.345 High  
cufflinks 127.625 0.0 374.602 High  
cufflinks 57.425 0.0 154.322 High Low
cufflinks 129.47 0.0 380.909 High  

0 Strain