Gene : Phvul.002G078000 P. vulgaris v2.1
Defline:  (1 of 4) PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Genomic Order:  783
Name:  ? Phvul.002G078000 Secondary Identifier:  ? PAC:37176420
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G078000 0.5kb upstream 0.5kb upstream 1693 true Chr02: 12015810-12017502 Phaseolus vulgaris
Phvul.002G078000 0.5kb upstream 0.5kb upstream 500 false Chr02: 12015810-12016309 Phaseolus vulgaris
Phvul.002G078000 0.5kb downstream 0.5kb downstream 1693 true Chr02: 12016310-12018002 Phaseolus vulgaris
Phvul.002G078000 0.5kb downstream 0.5kb downstream 500 false Chr02: 12017503-12018002 Phaseolus vulgaris
Phvul.002G078000 1.0kb upstream 1.0kb upstream 2193 true Chr02: 12015310-12017502 Phaseolus vulgaris
Phvul.002G078000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12015310-12016309 Phaseolus vulgaris
Phvul.002G078000 1.0kb downstream 1.0kb downstream 2193 true Chr02: 12016310-12018502 Phaseolus vulgaris
Phvul.002G078000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12017503-12018502 Phaseolus vulgaris
Phvul.002G078000 2.0kb upstream 2.0kb upstream 3193 true Chr02: 12014310-12017502 Phaseolus vulgaris
Phvul.002G078000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12014310-12016309 Phaseolus vulgaris
Phvul.002G078000 2.0kb downstream 2.0kb downstream 3193 true Chr02: 12016310-12019502 Phaseolus vulgaris
Phvul.002G078000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12017503-12019502 Phaseolus vulgaris
Phvul.002G078000 5.0kb upstream 5.0kb upstream 6193 true Chr02: 12011310-12017502 Phaseolus vulgaris
Phvul.002G078000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12011310-12016309 Phaseolus vulgaris
Phvul.002G078000 5.0kb downstream 5.0kb downstream 6193 true Chr02: 12016310-12022502 Phaseolus vulgaris
Phvul.002G078000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12017503-12022502 Phaseolus vulgaris
Phvul.002G078000 10.0kb upstream 10.0kb upstream 11193 true Chr02: 12006310-12017502 Phaseolus vulgaris
Phvul.002G078000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12006310-12016309 Phaseolus vulgaris
Phvul.002G078000 10.0kb downstream 10.0kb downstream 11193 true Chr02: 12016310-12027502 Phaseolus vulgaris
Phvul.002G078000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12017503-12027502 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313723 5265 Fabidae View MSA
124074512 5270 Rosid View MSA
123750397 5271 Pentapetalae View MSA
122786735 5272 Eudicot View MSA
122049165 5273 Angiosperm View MSA
121344608 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.7799 0.0 12.2958    
cufflinks 3.08802 0.0 10.253    
cufflinks 2.05385 0.0 7.15435    
cufflinks 3.9589 0.0 12.8951   High
cufflinks 3.1193 0.0 10.3601    
cufflinks 2.06241 0.0 7.18207    
cufflinks 2.65696 0.0 8.96111    
cufflinks 1.34062 0.0 4.85111   Low
cufflinks 1.71153 0.0 6.0736    
cufflinks 4.9133 0.0 15.4619   High
cufflinks 1.73086 0.0 6.11878    

0 Strain