Gene : Phvul.002G078600 P. vulgaris v2.1
Defline:  (1 of 6) PTHR12374:SF26 - F25A4.19 PROTEIN Genomic Order:  790
Name:  ? Phvul.002G078600 Secondary Identifier:  ? PAC:37175531
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G078600 0.5kb upstream 0.5kb upstream 2602 true Chr02: 12195834-12198435 Phaseolus vulgaris
Phvul.002G078600 0.5kb upstream 0.5kb upstream 500 false Chr02: 12195834-12196333 Phaseolus vulgaris
Phvul.002G078600 0.5kb downstream 0.5kb downstream 2602 true Chr02: 12196334-12198935 Phaseolus vulgaris
Phvul.002G078600 0.5kb downstream 0.5kb downstream 500 false Chr02: 12198436-12198935 Phaseolus vulgaris
Phvul.002G078600 1.0kb upstream 1.0kb upstream 3102 true Chr02: 12195334-12198435 Phaseolus vulgaris
Phvul.002G078600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12195334-12196333 Phaseolus vulgaris
Phvul.002G078600 1.0kb downstream 1.0kb downstream 3102 true Chr02: 12196334-12199435 Phaseolus vulgaris
Phvul.002G078600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12198436-12199435 Phaseolus vulgaris
Phvul.002G078600 2.0kb upstream 2.0kb upstream 4102 true Chr02: 12194334-12198435 Phaseolus vulgaris
Phvul.002G078600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12194334-12196333 Phaseolus vulgaris
Phvul.002G078600 2.0kb downstream 2.0kb downstream 4102 true Chr02: 12196334-12200435 Phaseolus vulgaris
Phvul.002G078600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12198436-12200435 Phaseolus vulgaris
Phvul.002G078600 5.0kb upstream 5.0kb upstream 7102 true Chr02: 12191334-12198435 Phaseolus vulgaris
Phvul.002G078600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12191334-12196333 Phaseolus vulgaris
Phvul.002G078600 5.0kb downstream 5.0kb downstream 7102 true Chr02: 12196334-12203435 Phaseolus vulgaris
Phvul.002G078600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12198436-12203435 Phaseolus vulgaris
Phvul.002G078600 10.0kb upstream 10.0kb upstream 12102 true Chr02: 12186334-12198435 Phaseolus vulgaris
Phvul.002G078600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12186334-12196333 Phaseolus vulgaris
Phvul.002G078600 10.0kb downstream 10.0kb downstream 12102 true Chr02: 12196334-12208435 Phaseolus vulgaris
Phvul.002G078600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12198436-12208435 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301732 5265 Fabidae View MSA
124061348 5270 Rosid View MSA
123752773 5271 Pentapetalae View MSA
122794974 5272 Eudicot View MSA
122050347 5273 Angiosperm View MSA
121350990 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6518 0.0 68.8898    
cufflinks 39.5662 0.0 102.838 High  
cufflinks 22.8824 0.0 59.3254    
cufflinks 17.9718 0.0 46.7477   Low
cufflinks 38.9825 0.0 101.323 High  
cufflinks 35.522 0.0 92.0233 High  
cufflinks 32.8031 0.0 84.9962 High  
cufflinks 15.7583 0.0 41.2827   Low
cufflinks 29.389 0.0 75.9964    
cufflinks 50.1959 0.0 131.942 High High
cufflinks 41.6579 0.0 108.642 High  

0 Strain