Gene : Phvul.002G078300 P. vulgaris v2.1
Defline:  (1 of 5) PF13704 - Glycosyl transferase family 2 (Glyco_tranf_2_4) Genomic Order:  787
Name:  ? Phvul.002G078300 Secondary Identifier:  ? PAC:37177079
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G078300 0.5kb upstream 0.5kb upstream 2297 true Chr02: 12126140-12128436 Phaseolus vulgaris
Phvul.002G078300 0.5kb upstream 0.5kb upstream 500 false Chr02: 12126140-12126639 Phaseolus vulgaris
Phvul.002G078300 0.5kb downstream 0.5kb downstream 2297 true Chr02: 12126640-12128936 Phaseolus vulgaris
Phvul.002G078300 0.5kb downstream 0.5kb downstream 500 false Chr02: 12128437-12128936 Phaseolus vulgaris
Phvul.002G078300 1.0kb upstream 1.0kb upstream 2797 true Chr02: 12125640-12128436 Phaseolus vulgaris
Phvul.002G078300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12125640-12126639 Phaseolus vulgaris
Phvul.002G078300 1.0kb downstream 1.0kb downstream 2797 true Chr02: 12126640-12129436 Phaseolus vulgaris
Phvul.002G078300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12128437-12129436 Phaseolus vulgaris
Phvul.002G078300 2.0kb upstream 2.0kb upstream 3797 true Chr02: 12124640-12128436 Phaseolus vulgaris
Phvul.002G078300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12124640-12126639 Phaseolus vulgaris
Phvul.002G078300 2.0kb downstream 2.0kb downstream 3797 true Chr02: 12126640-12130436 Phaseolus vulgaris
Phvul.002G078300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12128437-12130436 Phaseolus vulgaris
Phvul.002G078300 5.0kb upstream 5.0kb upstream 6797 true Chr02: 12121640-12128436 Phaseolus vulgaris
Phvul.002G078300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12121640-12126639 Phaseolus vulgaris
Phvul.002G078300 5.0kb downstream 5.0kb downstream 6797 true Chr02: 12126640-12133436 Phaseolus vulgaris
Phvul.002G078300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12128437-12133436 Phaseolus vulgaris
Phvul.002G078300 10.0kb upstream 10.0kb upstream 11797 true Chr02: 12116640-12128436 Phaseolus vulgaris
Phvul.002G078300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12116640-12126639 Phaseolus vulgaris
Phvul.002G078300 10.0kb downstream 10.0kb downstream 11797 true Chr02: 12126640-12138436 Phaseolus vulgaris
Phvul.002G078300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12128437-12138436 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300133 5265 Fabidae View MSA
124068456 5270 Rosid View MSA
123741891 5271 Pentapetalae View MSA
122797003 5272 Eudicot View MSA
122047525 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.7299 0.0 152.294 High High
cufflinks 11.3743 0.0 30.1063    
cufflinks 4.97904 0.0 14.1445   Low
cufflinks 10.0116 0.0 26.7113    
cufflinks 9.18557 0.0 24.6681    
cufflinks 7.05858 0.0 19.4018    
cufflinks 11.573 0.0 30.522    
cufflinks 6.66424 0.0 18.4026    
cufflinks 9.53427 0.0 25.5166    
cufflinks 21.74 0.0 56.2026   High
cufflinks 9.56641 0.0 25.6058    

0 Strain