Gene : Phvul.002G079600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31558:SF3 - CW14 PROTEIN Genomic Order:  800
Name:  ? Phvul.002G079600 Secondary Identifier:  ? PAC:37177427
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G079600 0.5kb upstream 0.5kb upstream 6085 true Chr02: 12366708-12372792 Phaseolus vulgaris
Phvul.002G079600 0.5kb upstream 0.5kb upstream 500 false Chr02: 12366708-12367207 Phaseolus vulgaris
Phvul.002G079600 0.5kb downstream 0.5kb downstream 6085 true Chr02: 12367208-12373292 Phaseolus vulgaris
Phvul.002G079600 0.5kb downstream 0.5kb downstream 500 false Chr02: 12372793-12373292 Phaseolus vulgaris
Phvul.002G079600 1.0kb upstream 1.0kb upstream 6585 true Chr02: 12366208-12372792 Phaseolus vulgaris
Phvul.002G079600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12366208-12367207 Phaseolus vulgaris
Phvul.002G079600 1.0kb downstream 1.0kb downstream 6585 true Chr02: 12367208-12373792 Phaseolus vulgaris
Phvul.002G079600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12372793-12373792 Phaseolus vulgaris
Phvul.002G079600 2.0kb upstream 2.0kb upstream 7585 true Chr02: 12365208-12372792 Phaseolus vulgaris
Phvul.002G079600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12365208-12367207 Phaseolus vulgaris
Phvul.002G079600 2.0kb downstream 2.0kb downstream 7585 true Chr02: 12367208-12374792 Phaseolus vulgaris
Phvul.002G079600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12372793-12374792 Phaseolus vulgaris
Phvul.002G079600 5.0kb upstream 5.0kb upstream 10585 true Chr02: 12362208-12372792 Phaseolus vulgaris
Phvul.002G079600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12362208-12367207 Phaseolus vulgaris
Phvul.002G079600 5.0kb downstream 5.0kb downstream 10585 true Chr02: 12367208-12377792 Phaseolus vulgaris
Phvul.002G079600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12372793-12377792 Phaseolus vulgaris
Phvul.002G079600 10.0kb upstream 10.0kb upstream 15585 true Chr02: 12357208-12372792 Phaseolus vulgaris
Phvul.002G079600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12357208-12367207 Phaseolus vulgaris
Phvul.002G079600 10.0kb downstream 10.0kb downstream 15585 true Chr02: 12367208-12382792 Phaseolus vulgaris
Phvul.002G079600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12372793-12382792 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305252 5265 Fabidae View MSA
124062593 5270 Rosid View MSA
123751029 5271 Pentapetalae View MSA
122786126 5272 Eudicot View MSA
122041786 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5318 0.0 52.5205   High
cufflinks 8.61435 0.0 31.0263    
cufflinks 16.4208 0.0 58.6052   High
cufflinks 9.24518 0.0 34.524    
cufflinks 9.81118 0.0 34.6625    
cufflinks 7.97866 0.0 31.8291    
cufflinks 12.8693 0.0 47.6415    
cufflinks 10.5668 0.0 39.4856    
cufflinks 12.6768 0.0 47.3625    
cufflinks 6.69397 0.0 25.3084   Low
cufflinks 7.9483 0.0 29.642    

0 Strain