Gene : Phvul.002G079900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11214:SF103 - BETA-1,3-GALACTOSYLTRANSFERASE 17-RELATED Genomic Order:  803
Name:  ? Phvul.002G079900 Secondary Identifier:  ? PAC:37174840
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G079900 0.5kb upstream 0.5kb upstream 5309 true Chr02: 12410501-12415809 Phaseolus vulgaris
Phvul.002G079900 0.5kb upstream 0.5kb upstream 500 false Chr02: 12410501-12411000 Phaseolus vulgaris
Phvul.002G079900 0.5kb downstream 0.5kb downstream 5309 true Chr02: 12411001-12416309 Phaseolus vulgaris
Phvul.002G079900 0.5kb downstream 0.5kb downstream 500 false Chr02: 12415810-12416309 Phaseolus vulgaris
Phvul.002G079900 1.0kb upstream 1.0kb upstream 5809 true Chr02: 12410001-12415809 Phaseolus vulgaris
Phvul.002G079900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12410001-12411000 Phaseolus vulgaris
Phvul.002G079900 1.0kb downstream 1.0kb downstream 5809 true Chr02: 12411001-12416809 Phaseolus vulgaris
Phvul.002G079900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12415810-12416809 Phaseolus vulgaris
Phvul.002G079900 2.0kb upstream 2.0kb upstream 6809 true Chr02: 12409001-12415809 Phaseolus vulgaris
Phvul.002G079900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12409001-12411000 Phaseolus vulgaris
Phvul.002G079900 2.0kb downstream 2.0kb downstream 6809 true Chr02: 12411001-12417809 Phaseolus vulgaris
Phvul.002G079900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12415810-12417809 Phaseolus vulgaris
Phvul.002G079900 5.0kb upstream 5.0kb upstream 9809 true Chr02: 12406001-12415809 Phaseolus vulgaris
Phvul.002G079900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12406001-12411000 Phaseolus vulgaris
Phvul.002G079900 5.0kb downstream 5.0kb downstream 9809 true Chr02: 12411001-12420809 Phaseolus vulgaris
Phvul.002G079900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12415810-12420809 Phaseolus vulgaris
Phvul.002G079900 10.0kb upstream 10.0kb upstream 14809 true Chr02: 12401001-12415809 Phaseolus vulgaris
Phvul.002G079900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12401001-12411000 Phaseolus vulgaris
Phvul.002G079900 10.0kb downstream 10.0kb downstream 14809 true Chr02: 12411001-12425809 Phaseolus vulgaris
Phvul.002G079900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12415810-12425809 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313000 5265 Fabidae View MSA
124070105 5270 Rosid View MSA
123744575 5271 Pentapetalae View MSA
122795543 5272 Eudicot View MSA
122042506 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.27038 0.0 6.60821   Low
cufflinks 7.86506 0.0 20.6179    
cufflinks 2.6061 0.0 7.49947    
cufflinks 3.83601 0.0 10.7158    
cufflinks 5.44708 0.0 14.6707    
cufflinks 2.51175 0.0 7.24265    
cufflinks 3.75786 0.0 10.3828    
cufflinks 4.73125 0.0 12.8279    
cufflinks 3.01122 0.0 8.51693    
cufflinks 18.5877 0.0 48.2473   High
cufflinks 5.26089 0.0 14.1684    

0 Strain