Gene : Phvul.002G080400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR27005:SF56 - PROTEIN KINASE SUPERFAMILY PROTEIN Genomic Order:  808
Name:  ? Phvul.002G080400 Secondary Identifier:  ? PAC:37174985
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G080400 0.5kb upstream 0.5kb upstream 3042 true Chr02: 12520108-12523149 Phaseolus vulgaris
Phvul.002G080400 0.5kb upstream 0.5kb upstream 500 false Chr02: 12522650-12523149 Phaseolus vulgaris
Phvul.002G080400 0.5kb downstream 0.5kb downstream 3042 true Chr02: 12519608-12522649 Phaseolus vulgaris
Phvul.002G080400 0.5kb downstream 0.5kb downstream 500 false Chr02: 12519608-12520107 Phaseolus vulgaris
Phvul.002G080400 1.0kb upstream 1.0kb upstream 3542 true Chr02: 12520108-12523649 Phaseolus vulgaris
Phvul.002G080400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12522650-12523649 Phaseolus vulgaris
Phvul.002G080400 1.0kb downstream 1.0kb downstream 3542 true Chr02: 12519108-12522649 Phaseolus vulgaris
Phvul.002G080400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12519108-12520107 Phaseolus vulgaris
Phvul.002G080400 2.0kb upstream 2.0kb upstream 4542 true Chr02: 12520108-12524649 Phaseolus vulgaris
Phvul.002G080400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12522650-12524649 Phaseolus vulgaris
Phvul.002G080400 2.0kb downstream 2.0kb downstream 4542 true Chr02: 12518108-12522649 Phaseolus vulgaris
Phvul.002G080400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12518108-12520107 Phaseolus vulgaris
Phvul.002G080400 5.0kb upstream 5.0kb upstream 7542 true Chr02: 12520108-12527649 Phaseolus vulgaris
Phvul.002G080400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12522650-12527649 Phaseolus vulgaris
Phvul.002G080400 5.0kb downstream 5.0kb downstream 7542 true Chr02: 12515108-12522649 Phaseolus vulgaris
Phvul.002G080400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12515108-12520107 Phaseolus vulgaris
Phvul.002G080400 10.0kb upstream 10.0kb upstream 12542 true Chr02: 12520108-12532649 Phaseolus vulgaris
Phvul.002G080400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12522650-12532649 Phaseolus vulgaris
Phvul.002G080400 10.0kb downstream 10.0kb downstream 12542 true Chr02: 12510108-12522649 Phaseolus vulgaris
Phvul.002G080400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12510108-12520107 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307736 5265 Fabidae View MSA
124064830 5270 Rosid View MSA
123748865 5271 Pentapetalae View MSA
122793730 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.94888 0.0 13.7056   Low
cufflinks 15.7074 0.0 40.6358    
cufflinks 8.87226 0.0 23.5319    
cufflinks 11.7145 0.0 30.3991    
cufflinks 20.507 0.0 53.1283    
cufflinks 19.3033 0.0 49.9062    
cufflinks 20.43 0.0 52.9392    
cufflinks 20.9858 0.0 54.3158    
cufflinks 21.5345 0.0 55.8431    
cufflinks 7.15622 0.0 19.2022   Low
cufflinks 23.9119 0.0 62.168    

0 Strain