Gene : Phvul.002G071500 P. vulgaris v2.1
Defline:  (1 of 11) PF03181 - BURP domain (BURP) Genomic Order:  710
Name:  ? Phvul.002G071500 Secondary Identifier:  ? PAC:37174740
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G071500 0.5kb upstream 0.5kb upstream 3394 true Chr02: 9479919-9483312 Phaseolus vulgaris
Phvul.002G071500 0.5kb upstream 0.5kb upstream 500 false Chr02: 9479919-9480418 Phaseolus vulgaris
Phvul.002G071500 0.5kb downstream 0.5kb downstream 3394 true Chr02: 9480419-9483812 Phaseolus vulgaris
Phvul.002G071500 0.5kb downstream 0.5kb downstream 500 false Chr02: 9483313-9483812 Phaseolus vulgaris
Phvul.002G071500 1.0kb upstream 1.0kb upstream 3894 true Chr02: 9479419-9483312 Phaseolus vulgaris
Phvul.002G071500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9479419-9480418 Phaseolus vulgaris
Phvul.002G071500 1.0kb downstream 1.0kb downstream 3894 true Chr02: 9480419-9484312 Phaseolus vulgaris
Phvul.002G071500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9483313-9484312 Phaseolus vulgaris
Phvul.002G071500 2.0kb upstream 2.0kb upstream 4894 true Chr02: 9478419-9483312 Phaseolus vulgaris
Phvul.002G071500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9478419-9480418 Phaseolus vulgaris
Phvul.002G071500 2.0kb downstream 2.0kb downstream 4894 true Chr02: 9480419-9485312 Phaseolus vulgaris
Phvul.002G071500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9483313-9485312 Phaseolus vulgaris
Phvul.002G071500 5.0kb upstream 5.0kb upstream 7894 true Chr02: 9475419-9483312 Phaseolus vulgaris
Phvul.002G071500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9475419-9480418 Phaseolus vulgaris
Phvul.002G071500 5.0kb downstream 5.0kb downstream 7894 true Chr02: 9480419-9488312 Phaseolus vulgaris
Phvul.002G071500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9483313-9488312 Phaseolus vulgaris
Phvul.002G071500 10.0kb upstream 10.0kb upstream 12894 true Chr02: 9470419-9483312 Phaseolus vulgaris
Phvul.002G071500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9470419-9480418 Phaseolus vulgaris
Phvul.002G071500 10.0kb downstream 10.0kb downstream 12894 true Chr02: 9480419-9493312 Phaseolus vulgaris
Phvul.002G071500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9483313-9493312 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299341 5265 Fabidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2461 0.0 26.5732   Low
cufflinks 52.0223 0.0 145.32 High  
cufflinks 52.7905 0.0 146.631 High  
cufflinks 43.1238 0.0 119.212 High  
cufflinks 41.6953 0.0 114.131 High  
cufflinks 67.3782 0.0 194.049 High High
cufflinks 41.1843 0.0 113.571 High  
cufflinks 41.4723 0.0 113.643 High  
cufflinks 26.4483 0.0 70.123    
cufflinks 30.0977 0.0 80.0106    
cufflinks 57.8544 0.0 164.61 High  

0 Strain