Gene : Phvul.002G061100 P. vulgaris v2.1
Defline:  (1 of 1) PF13599 - Pentapeptide repeats (9 copies) (Pentapeptide_4) Genomic Order:  611
Name:  ? Phvul.002G061100 Secondary Identifier:  ? PAC:37176230
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G061100 0.5kb upstream 0.5kb upstream 3431 true Chr02: 7104150-7107580 Phaseolus vulgaris
Phvul.002G061100 0.5kb upstream 0.5kb upstream 500 false Chr02: 7107081-7107580 Phaseolus vulgaris
Phvul.002G061100 0.5kb downstream 0.5kb downstream 3431 true Chr02: 7103650-7107080 Phaseolus vulgaris
Phvul.002G061100 0.5kb downstream 0.5kb downstream 500 false Chr02: 7103650-7104149 Phaseolus vulgaris
Phvul.002G061100 1.0kb upstream 1.0kb upstream 3931 true Chr02: 7104150-7108080 Phaseolus vulgaris
Phvul.002G061100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7107081-7108080 Phaseolus vulgaris
Phvul.002G061100 1.0kb downstream 1.0kb downstream 3931 true Chr02: 7103150-7107080 Phaseolus vulgaris
Phvul.002G061100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7103150-7104149 Phaseolus vulgaris
Phvul.002G061100 2.0kb upstream 2.0kb upstream 4931 true Chr02: 7104150-7109080 Phaseolus vulgaris
Phvul.002G061100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7107081-7109080 Phaseolus vulgaris
Phvul.002G061100 2.0kb downstream 2.0kb downstream 4931 true Chr02: 7102150-7107080 Phaseolus vulgaris
Phvul.002G061100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7102150-7104149 Phaseolus vulgaris
Phvul.002G061100 5.0kb upstream 5.0kb upstream 7931 true Chr02: 7104150-7112080 Phaseolus vulgaris
Phvul.002G061100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7107081-7112080 Phaseolus vulgaris
Phvul.002G061100 5.0kb downstream 5.0kb downstream 7931 true Chr02: 7099150-7107080 Phaseolus vulgaris
Phvul.002G061100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7099150-7104149 Phaseolus vulgaris
Phvul.002G061100 10.0kb upstream 10.0kb upstream 12931 true Chr02: 7104150-7117080 Phaseolus vulgaris
Phvul.002G061100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7107081-7117080 Phaseolus vulgaris
Phvul.002G061100 10.0kb downstream 10.0kb downstream 12931 true Chr02: 7094150-7107080 Phaseolus vulgaris
Phvul.002G061100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7094150-7104149 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299546 5265 Fabidae View MSA
124066075 5270 Rosid View MSA
123751077 5271 Pentapetalae View MSA
122794954 5272 Eudicot View MSA
122044610 5273 Angiosperm View MSA
121348286 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1976 0.0 67.9278    
cufflinks 23.5112 0.0 61.1759    
cufflinks 87.3911 0.0 234.998 High High
cufflinks 22.2779 0.0 58.1474    
cufflinks 15.6926 0.0 41.92    
cufflinks 35.1506 0.0 90.8576 High  
cufflinks 0.975011 0.0 3.46575   Low
cufflinks 1.41767 0.0 4.83916   Low
cufflinks 1.03747 0.0 3.67065   Low
cufflinks 25.2396 0.0 65.5386    
cufflinks 11.7159 0.0 31.9982    

0 Strain