Gene : Phvul.002G061800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10972:SF88 - OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A-RELATED Genomic Order:  618
Name:  ? Phvul.002G061800 Secondary Identifier:  ? PAC:37175285
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G061800 0.5kb upstream 0.5kb upstream 11222 true Chr02: 7259735-7270956 Phaseolus vulgaris
Phvul.002G061800 0.5kb upstream 0.5kb upstream 500 false Chr02: 7259735-7260234 Phaseolus vulgaris
Phvul.002G061800 0.5kb downstream 0.5kb downstream 11222 true Chr02: 7260235-7271456 Phaseolus vulgaris
Phvul.002G061800 0.5kb downstream 0.5kb downstream 500 false Chr02: 7270957-7271456 Phaseolus vulgaris
Phvul.002G061800 1.0kb upstream 1.0kb upstream 11722 true Chr02: 7259235-7270956 Phaseolus vulgaris
Phvul.002G061800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7259235-7260234 Phaseolus vulgaris
Phvul.002G061800 1.0kb downstream 1.0kb downstream 11722 true Chr02: 7260235-7271956 Phaseolus vulgaris
Phvul.002G061800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7270957-7271956 Phaseolus vulgaris
Phvul.002G061800 2.0kb upstream 2.0kb upstream 12722 true Chr02: 7258235-7270956 Phaseolus vulgaris
Phvul.002G061800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7258235-7260234 Phaseolus vulgaris
Phvul.002G061800 2.0kb downstream 2.0kb downstream 12722 true Chr02: 7260235-7272956 Phaseolus vulgaris
Phvul.002G061800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7270957-7272956 Phaseolus vulgaris
Phvul.002G061800 5.0kb upstream 5.0kb upstream 15722 true Chr02: 7255235-7270956 Phaseolus vulgaris
Phvul.002G061800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7255235-7260234 Phaseolus vulgaris
Phvul.002G061800 5.0kb downstream 5.0kb downstream 15722 true Chr02: 7260235-7275956 Phaseolus vulgaris
Phvul.002G061800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7270957-7275956 Phaseolus vulgaris
Phvul.002G061800 10.0kb upstream 10.0kb upstream 20722 true Chr02: 7250235-7270956 Phaseolus vulgaris
Phvul.002G061800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7250235-7260234 Phaseolus vulgaris
Phvul.002G061800 10.0kb downstream 10.0kb downstream 20722 true Chr02: 7260235-7280956 Phaseolus vulgaris
Phvul.002G061800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7270957-7280956 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310093 5265 Fabidae View MSA
124074829 5270 Rosid View MSA
123752299 5271 Pentapetalae View MSA
122791261 5272 Eudicot View MSA
122049875 5273 Angiosperm View MSA
121348074 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.50811 0.0 14.1537   Low
cufflinks 6.42493 0.0 24.1085    
cufflinks 9.48679 0.0 36.7979    
cufflinks 14.4996 0.0 59.0119   High
cufflinks 6.7591 0.0 28.3238    
cufflinks 8.22059 0.0 41.5315    
cufflinks 5.84112 0.0 22.045    
cufflinks 6.77505 0.0 28.0196    
cufflinks 4.93348 0.0 21.5267    
cufflinks 15.4608 0.0 50.0007   High
cufflinks 9.52239 0.0 36.9316    

0 Strain