Gene : Phvul.002G064300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF4 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 Genomic Order:  644
Name:  ? Phvul.002G064300 Secondary Identifier:  ? PAC:37176355
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G064300 0.5kb upstream 0.5kb upstream 5754 true Chr02: 7727151-7732904 Phaseolus vulgaris
Phvul.002G064300 0.5kb upstream 0.5kb upstream 500 false Chr02: 7732405-7732904 Phaseolus vulgaris
Phvul.002G064300 0.5kb downstream 0.5kb downstream 5754 true Chr02: 7726651-7732404 Phaseolus vulgaris
Phvul.002G064300 0.5kb downstream 0.5kb downstream 500 false Chr02: 7726651-7727150 Phaseolus vulgaris
Phvul.002G064300 1.0kb upstream 1.0kb upstream 6254 true Chr02: 7727151-7733404 Phaseolus vulgaris
Phvul.002G064300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7732405-7733404 Phaseolus vulgaris
Phvul.002G064300 1.0kb downstream 1.0kb downstream 6254 true Chr02: 7726151-7732404 Phaseolus vulgaris
Phvul.002G064300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7726151-7727150 Phaseolus vulgaris
Phvul.002G064300 2.0kb upstream 2.0kb upstream 7254 true Chr02: 7727151-7734404 Phaseolus vulgaris
Phvul.002G064300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7732405-7734404 Phaseolus vulgaris
Phvul.002G064300 2.0kb downstream 2.0kb downstream 7254 true Chr02: 7725151-7732404 Phaseolus vulgaris
Phvul.002G064300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7725151-7727150 Phaseolus vulgaris
Phvul.002G064300 5.0kb upstream 5.0kb upstream 10254 true Chr02: 7727151-7737404 Phaseolus vulgaris
Phvul.002G064300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7732405-7737404 Phaseolus vulgaris
Phvul.002G064300 5.0kb downstream 5.0kb downstream 10254 true Chr02: 7722151-7732404 Phaseolus vulgaris
Phvul.002G064300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7722151-7727150 Phaseolus vulgaris
Phvul.002G064300 10.0kb upstream 10.0kb upstream 15254 true Chr02: 7727151-7742404 Phaseolus vulgaris
Phvul.002G064300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7732405-7742404 Phaseolus vulgaris
Phvul.002G064300 10.0kb downstream 10.0kb downstream 15254 true Chr02: 7717151-7732404 Phaseolus vulgaris
Phvul.002G064300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7717151-7727150 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310953 5265 Fabidae View MSA
124060625 5270 Rosid View MSA
123752142 5271 Pentapetalae View MSA
122792748 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.25049 0.0 17.1347    
cufflinks 9.80879 0.0 25.9579    
cufflinks 3.03842 0.0 8.9216    
cufflinks 13.2286 0.0 34.6192   High
cufflinks 5.70074 0.0 15.8398    
cufflinks 5.42777 0.0 15.0706    
cufflinks 2.65192 0.0 7.92137   Low
cufflinks 5.32974 0.0 14.7762    
cufflinks 1.8178 0.0 5.69097   Low
cufflinks 8.12014 0.0 21.7998    
cufflinks 8.16945 0.0 21.9693    

0 Strain