Gene : Phvul.002G065814 P. vulgaris v2.1
Defline:  (1 of 1) PF13975 - gag-polyprotein putative aspartyl protease (gag-asp_proteas) Genomic Order:  693
Name:  ? Phvul.002G065814 Secondary Identifier:  ? PAC:37177076
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G065814 0.5kb upstream 0.5kb upstream 2389 true Chr02: 9131348-9133736 Phaseolus vulgaris
Phvul.002G065814 0.5kb upstream 0.5kb upstream 500 false Chr02: 9133237-9133736 Phaseolus vulgaris
Phvul.002G065814 0.5kb downstream 0.5kb downstream 2389 true Chr02: 9130848-9133236 Phaseolus vulgaris
Phvul.002G065814 0.5kb downstream 0.5kb downstream 500 false Chr02: 9130848-9131347 Phaseolus vulgaris
Phvul.002G065814 1.0kb upstream 1.0kb upstream 2889 true Chr02: 9131348-9134236 Phaseolus vulgaris
Phvul.002G065814 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9133237-9134236 Phaseolus vulgaris
Phvul.002G065814 1.0kb downstream 1.0kb downstream 2889 true Chr02: 9130348-9133236 Phaseolus vulgaris
Phvul.002G065814 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9130348-9131347 Phaseolus vulgaris
Phvul.002G065814 2.0kb upstream 2.0kb upstream 3889 true Chr02: 9131348-9135236 Phaseolus vulgaris
Phvul.002G065814 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9133237-9135236 Phaseolus vulgaris
Phvul.002G065814 2.0kb downstream 2.0kb downstream 3889 true Chr02: 9129348-9133236 Phaseolus vulgaris
Phvul.002G065814 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9129348-9131347 Phaseolus vulgaris
Phvul.002G065814 5.0kb upstream 5.0kb upstream 6889 true Chr02: 9131348-9138236 Phaseolus vulgaris
Phvul.002G065814 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9133237-9138236 Phaseolus vulgaris
Phvul.002G065814 5.0kb downstream 5.0kb downstream 6889 true Chr02: 9126348-9133236 Phaseolus vulgaris
Phvul.002G065814 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9126348-9131347 Phaseolus vulgaris
Phvul.002G065814 10.0kb upstream 10.0kb upstream 11889 true Chr02: 9131348-9143236 Phaseolus vulgaris
Phvul.002G065814 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9133237-9143236 Phaseolus vulgaris
Phvul.002G065814 10.0kb downstream 10.0kb downstream 11889 true Chr02: 9121348-9133236 Phaseolus vulgaris
Phvul.002G065814 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9121348-9131347 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029860 5273 Angiosperm View MSA
122297168 5265 Fabidae View MSA
124042202 5270 Rosid View MSA
123753670 5271 Pentapetalae View MSA
122775191 5272 Eudicot View MSA
121350456 5274 Embryophyte View MSA
123381742 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0386652 0.0 0.177972 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain