Gene : Phvul.002G068600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31471:SF5 - F7A19.1 PROTEIN-RELATED Genomic Order:  664
Name:  ? Phvul.002G068600 Secondary Identifier:  ? PAC:37177842
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G068600 0.5kb upstream 0.5kb upstream 3236 true Chr02: 8268310-8271545 Phaseolus vulgaris
Phvul.002G068600 0.5kb upstream 0.5kb upstream 500 false Chr02: 8271046-8271545 Phaseolus vulgaris
Phvul.002G068600 0.5kb downstream 0.5kb downstream 3236 true Chr02: 8267810-8271045 Phaseolus vulgaris
Phvul.002G068600 0.5kb downstream 0.5kb downstream 500 false Chr02: 8267810-8268309 Phaseolus vulgaris
Phvul.002G068600 1.0kb upstream 1.0kb upstream 3736 true Chr02: 8268310-8272045 Phaseolus vulgaris
Phvul.002G068600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 8271046-8272045 Phaseolus vulgaris
Phvul.002G068600 1.0kb downstream 1.0kb downstream 3736 true Chr02: 8267310-8271045 Phaseolus vulgaris
Phvul.002G068600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 8267310-8268309 Phaseolus vulgaris
Phvul.002G068600 2.0kb upstream 2.0kb upstream 4736 true Chr02: 8268310-8273045 Phaseolus vulgaris
Phvul.002G068600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 8271046-8273045 Phaseolus vulgaris
Phvul.002G068600 2.0kb downstream 2.0kb downstream 4736 true Chr02: 8266310-8271045 Phaseolus vulgaris
Phvul.002G068600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 8266310-8268309 Phaseolus vulgaris
Phvul.002G068600 5.0kb upstream 5.0kb upstream 7736 true Chr02: 8268310-8276045 Phaseolus vulgaris
Phvul.002G068600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 8271046-8276045 Phaseolus vulgaris
Phvul.002G068600 5.0kb downstream 5.0kb downstream 7736 true Chr02: 8263310-8271045 Phaseolus vulgaris
Phvul.002G068600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 8263310-8268309 Phaseolus vulgaris
Phvul.002G068600 10.0kb upstream 10.0kb upstream 12736 true Chr02: 8268310-8281045 Phaseolus vulgaris
Phvul.002G068600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 8271046-8281045 Phaseolus vulgaris
Phvul.002G068600 10.0kb downstream 10.0kb downstream 12736 true Chr02: 8258310-8271045 Phaseolus vulgaris
Phvul.002G068600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 8258310-8268309 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313838 5265 Fabidae View MSA
124067331 5270 Rosid View MSA
123743301 5271 Pentapetalae View MSA
122785962 5272 Eudicot View MSA
122046152 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.938218 0.0 5.27942    
cufflinks 0.460587 0.0 2.16281 Low  
cufflinks 1.60818 0.0 7.87655    
cufflinks 1.00906 0.0 4.46665    
cufflinks 3.21092 0.0 13.6262    
cufflinks 0.457667 0.0 3.04261 Low  
cufflinks 2.44752 0.0 10.6986    
cufflinks 0.873616 0.0 4.92441    
cufflinks 4.17542 0.0 15.8063   High
cufflinks 0.0466422 0.0 0.239206 Low Low
cufflinks 1.63418 0.0 8.42579    

0 Strain