Gene : Phvul.002G054000 P. vulgaris v2.1
Genomic Order:  539 Name:  ? Phvul.002G054000
Secondary Identifier:  ? PAC:37178045
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G054000 0.5kb upstream 0.5kb upstream 2117 true Chr02: 4904949-4907065 Phaseolus vulgaris
Phvul.002G054000 0.5kb upstream 0.5kb upstream 500 false Chr02: 4904949-4905448 Phaseolus vulgaris
Phvul.002G054000 0.5kb downstream 0.5kb downstream 2117 true Chr02: 4905449-4907565 Phaseolus vulgaris
Phvul.002G054000 0.5kb downstream 0.5kb downstream 500 false Chr02: 4907066-4907565 Phaseolus vulgaris
Phvul.002G054000 1.0kb upstream 1.0kb upstream 2617 true Chr02: 4904449-4907065 Phaseolus vulgaris
Phvul.002G054000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4904449-4905448 Phaseolus vulgaris
Phvul.002G054000 1.0kb downstream 1.0kb downstream 2617 true Chr02: 4905449-4908065 Phaseolus vulgaris
Phvul.002G054000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4907066-4908065 Phaseolus vulgaris
Phvul.002G054000 2.0kb upstream 2.0kb upstream 3617 true Chr02: 4903449-4907065 Phaseolus vulgaris
Phvul.002G054000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4903449-4905448 Phaseolus vulgaris
Phvul.002G054000 2.0kb downstream 2.0kb downstream 3617 true Chr02: 4905449-4909065 Phaseolus vulgaris
Phvul.002G054000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4907066-4909065 Phaseolus vulgaris
Phvul.002G054000 5.0kb upstream 5.0kb upstream 6617 true Chr02: 4900449-4907065 Phaseolus vulgaris
Phvul.002G054000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4900449-4905448 Phaseolus vulgaris
Phvul.002G054000 5.0kb downstream 5.0kb downstream 6617 true Chr02: 4905449-4912065 Phaseolus vulgaris
Phvul.002G054000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4907066-4912065 Phaseolus vulgaris
Phvul.002G054000 10.0kb upstream 10.0kb upstream 11617 true Chr02: 4895449-4907065 Phaseolus vulgaris
Phvul.002G054000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4895449-4905448 Phaseolus vulgaris
Phvul.002G054000 10.0kb downstream 10.0kb downstream 11617 true Chr02: 4905449-4917065 Phaseolus vulgaris
Phvul.002G054000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4907066-4917065 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311039 5265 Fabidae View MSA
124072972 5270 Rosid View MSA
123750423 5271 Pentapetalae View MSA
122791273 5272 Eudicot View MSA
122042283 5273 Angiosperm View MSA
121309946 5274 Embryophyte View MSA
123347571 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.07223 0.0 9.40354    
cufflinks 41.9954 0.0 109.178 High  
cufflinks 99.0748 0.0 273.298 High High
cufflinks 12.3576 0.0 32.8441    
cufflinks 32.2636 0.0 83.4991    
cufflinks 53.2112 0.0 139.768 High  
cufflinks 0.746291 0.0 2.66027    
cufflinks 0.368074 0.0 1.40363 Low Low
cufflinks 0.071593 0.0 0.310924 Low Low
cufflinks 7.5179 0.0 20.9572    
cufflinks 45.4169 0.0 118.644 High  

0 Strain