Gene : Phvul.002G054400 P. vulgaris v2.1
Defline:  (1 of 1) K06972 - uncharacterized protein (K06972) Genomic Order:  543
Name:  ? Phvul.002G054400 Secondary Identifier:  ? PAC:37178638
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G054400 0.5kb upstream 0.5kb upstream 10332 true Chr02: 4936236-4946567 Phaseolus vulgaris
Phvul.002G054400 0.5kb upstream 0.5kb upstream 500 false Chr02: 4946068-4946567 Phaseolus vulgaris
Phvul.002G054400 0.5kb downstream 0.5kb downstream 10332 true Chr02: 4935736-4946067 Phaseolus vulgaris
Phvul.002G054400 0.5kb downstream 0.5kb downstream 500 false Chr02: 4935736-4936235 Phaseolus vulgaris
Phvul.002G054400 1.0kb upstream 1.0kb upstream 10832 true Chr02: 4936236-4947067 Phaseolus vulgaris
Phvul.002G054400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4946068-4947067 Phaseolus vulgaris
Phvul.002G054400 1.0kb downstream 1.0kb downstream 10832 true Chr02: 4935236-4946067 Phaseolus vulgaris
Phvul.002G054400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4935236-4936235 Phaseolus vulgaris
Phvul.002G054400 2.0kb upstream 2.0kb upstream 11832 true Chr02: 4936236-4948067 Phaseolus vulgaris
Phvul.002G054400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4946068-4948067 Phaseolus vulgaris
Phvul.002G054400 2.0kb downstream 2.0kb downstream 11832 true Chr02: 4934236-4946067 Phaseolus vulgaris
Phvul.002G054400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4934236-4936235 Phaseolus vulgaris
Phvul.002G054400 5.0kb upstream 5.0kb upstream 14832 true Chr02: 4936236-4951067 Phaseolus vulgaris
Phvul.002G054400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4946068-4951067 Phaseolus vulgaris
Phvul.002G054400 5.0kb downstream 5.0kb downstream 14832 true Chr02: 4931236-4946067 Phaseolus vulgaris
Phvul.002G054400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4931236-4936235 Phaseolus vulgaris
Phvul.002G054400 10.0kb upstream 10.0kb upstream 19832 true Chr02: 4936236-4956067 Phaseolus vulgaris
Phvul.002G054400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4946068-4956067 Phaseolus vulgaris
Phvul.002G054400 10.0kb downstream 10.0kb downstream 19832 true Chr02: 4926236-4946067 Phaseolus vulgaris
Phvul.002G054400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4926236-4936235 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300924 5265 Fabidae View MSA
124061044 5270 Rosid View MSA
123737107 5271 Pentapetalae View MSA
122792792 5272 Eudicot View MSA
122042751 5273 Angiosperm View MSA
121343874 5274 Embryophyte View MSA
123424762 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.2731 0.0 66.7617    
cufflinks 31.8061 0.0 85.2536    
cufflinks 130.272 0.0 421.088 High High
cufflinks 18.0355 0.0 46.7556    
cufflinks 20.1626 0.0 52.4743    
cufflinks 64.7788 0.0 187.002 High High
cufflinks 17.3383 0.0 44.9662    
cufflinks 23.3341 0.0 61.3632    
cufflinks 20.0723 0.0 52.2417    
cufflinks 39.8351 0.0 108.97 High  
cufflinks 16.3983 0.0 42.4458    

0 Strain