Gene : Phvul.002G056000 P. vulgaris v2.1
Defline:  (1 of 12) KOG0324 - Uncharacterized conserved protein Genomic Order:  559
Name:  ? Phvul.002G056000 Secondary Identifier:  ? PAC:37176800
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G056000 0.5kb upstream 0.5kb upstream 3629 true Chr02: 5818979-5822607 Phaseolus vulgaris
Phvul.002G056000 0.5kb upstream 0.5kb upstream 500 false Chr02: 5818979-5819478 Phaseolus vulgaris
Phvul.002G056000 0.5kb downstream 0.5kb downstream 3629 true Chr02: 5819479-5823107 Phaseolus vulgaris
Phvul.002G056000 0.5kb downstream 0.5kb downstream 500 false Chr02: 5822608-5823107 Phaseolus vulgaris
Phvul.002G056000 1.0kb upstream 1.0kb upstream 4129 true Chr02: 5818479-5822607 Phaseolus vulgaris
Phvul.002G056000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5818479-5819478 Phaseolus vulgaris
Phvul.002G056000 1.0kb downstream 1.0kb downstream 4129 true Chr02: 5819479-5823607 Phaseolus vulgaris
Phvul.002G056000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5822608-5823607 Phaseolus vulgaris
Phvul.002G056000 2.0kb upstream 2.0kb upstream 5129 true Chr02: 5817479-5822607 Phaseolus vulgaris
Phvul.002G056000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5817479-5819478 Phaseolus vulgaris
Phvul.002G056000 2.0kb downstream 2.0kb downstream 5129 true Chr02: 5819479-5824607 Phaseolus vulgaris
Phvul.002G056000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5822608-5824607 Phaseolus vulgaris
Phvul.002G056000 5.0kb upstream 5.0kb upstream 8129 true Chr02: 5814479-5822607 Phaseolus vulgaris
Phvul.002G056000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5814479-5819478 Phaseolus vulgaris
Phvul.002G056000 5.0kb downstream 5.0kb downstream 8129 true Chr02: 5819479-5827607 Phaseolus vulgaris
Phvul.002G056000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5822608-5827607 Phaseolus vulgaris
Phvul.002G056000 10.0kb upstream 10.0kb upstream 13129 true Chr02: 5809479-5822607 Phaseolus vulgaris
Phvul.002G056000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5809479-5819478 Phaseolus vulgaris
Phvul.002G056000 10.0kb downstream 10.0kb downstream 13129 true Chr02: 5819479-5832607 Phaseolus vulgaris
Phvul.002G056000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5822608-5832607 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314996 5265 Fabidae View MSA
124071036 5270 Rosid View MSA
123751052 5271 Pentapetalae View MSA
122794591 5272 Eudicot View MSA
122048592 5273 Angiosperm View MSA
123429049 5275 Viridiplantae View MSA
121350542 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1315 0.0 33.6444    
cufflinks 19.4697 0.0 55.3888    
cufflinks 12.019 0.0 35.9747    
cufflinks 63.8475 0.0 166.347 High High
cufflinks 12.3438 0.0 37.166    
cufflinks 10.4006 0.0 31.7057    
cufflinks 9.71219 0.0 29.909    
cufflinks 10.9365 0.0 33.0306    
cufflinks 11.1542 0.0 33.895    
cufflinks 11.5445 0.0 34.8312    
cufflinks 11.1024 0.0 33.7864    

0 Strain