Gene : Phvul.002G055700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31190:SF30 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15-RELATED Genomic Order:  556
Name:  ? Phvul.002G055700 Secondary Identifier:  ? PAC:37175928
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G055700 0.5kb upstream 0.5kb upstream 1812 true Chr02: 5761710-5763521 Phaseolus vulgaris
Phvul.002G055700 0.5kb upstream 0.5kb upstream 500 false Chr02: 5763022-5763521 Phaseolus vulgaris
Phvul.002G055700 0.5kb downstream 0.5kb downstream 1812 true Chr02: 5761210-5763021 Phaseolus vulgaris
Phvul.002G055700 0.5kb downstream 0.5kb downstream 500 false Chr02: 5761210-5761709 Phaseolus vulgaris
Phvul.002G055700 1.0kb upstream 1.0kb upstream 2312 true Chr02: 5761710-5764021 Phaseolus vulgaris
Phvul.002G055700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5763022-5764021 Phaseolus vulgaris
Phvul.002G055700 1.0kb downstream 1.0kb downstream 2312 true Chr02: 5760710-5763021 Phaseolus vulgaris
Phvul.002G055700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5760710-5761709 Phaseolus vulgaris
Phvul.002G055700 2.0kb upstream 2.0kb upstream 3312 true Chr02: 5761710-5765021 Phaseolus vulgaris
Phvul.002G055700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5763022-5765021 Phaseolus vulgaris
Phvul.002G055700 2.0kb downstream 2.0kb downstream 3312 true Chr02: 5759710-5763021 Phaseolus vulgaris
Phvul.002G055700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5759710-5761709 Phaseolus vulgaris
Phvul.002G055700 5.0kb upstream 5.0kb upstream 6312 true Chr02: 5761710-5768021 Phaseolus vulgaris
Phvul.002G055700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5763022-5768021 Phaseolus vulgaris
Phvul.002G055700 5.0kb downstream 5.0kb downstream 6312 true Chr02: 5756710-5763021 Phaseolus vulgaris
Phvul.002G055700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5756710-5761709 Phaseolus vulgaris
Phvul.002G055700 10.0kb upstream 10.0kb upstream 11312 true Chr02: 5761710-5773021 Phaseolus vulgaris
Phvul.002G055700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5763022-5773021 Phaseolus vulgaris
Phvul.002G055700 10.0kb downstream 10.0kb downstream 11312 true Chr02: 5751710-5763021 Phaseolus vulgaris
Phvul.002G055700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5751710-5761709 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310173 5265 Fabidae View MSA
124072415 5270 Rosid View MSA
123749179 5271 Pentapetalae View MSA
122791440 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.6355 0.0 63.7165   High
cufflinks 5.96514 0.0 17.0204   Low
cufflinks 6.52897 0.0 18.6031   Low
cufflinks 9.29113 0.0 25.3266    
cufflinks 16.3317 0.0 42.8214    
cufflinks 5.79686 0.0 16.5955   Low
cufflinks 24.2251 0.0 62.6455   High
cufflinks 14.5412 0.0 38.3979    
cufflinks 8.50397 0.0 23.3451    
cufflinks 15.0346 0.0 39.6256    
cufflinks 10.4661 0.0 28.2338    

0 Strain