Gene : Phvul.002G060300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23050:SF214 - CALCIUM-BINDING PROTEIN CML14-RELATED Genomic Order:  603
Name:  ? Phvul.002G060300 Secondary Identifier:  ? PAC:37175548
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G060300 0.5kb upstream 0.5kb upstream 1390 true Chr02: 6633565-6634954 Phaseolus vulgaris
Phvul.002G060300 0.5kb upstream 0.5kb upstream 500 false Chr02: 6633565-6634064 Phaseolus vulgaris
Phvul.002G060300 0.5kb downstream 0.5kb downstream 1390 true Chr02: 6634065-6635454 Phaseolus vulgaris
Phvul.002G060300 0.5kb downstream 0.5kb downstream 500 false Chr02: 6634955-6635454 Phaseolus vulgaris
Phvul.002G060300 1.0kb upstream 1.0kb upstream 1890 true Chr02: 6633065-6634954 Phaseolus vulgaris
Phvul.002G060300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6633065-6634064 Phaseolus vulgaris
Phvul.002G060300 1.0kb downstream 1.0kb downstream 1890 true Chr02: 6634065-6635954 Phaseolus vulgaris
Phvul.002G060300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6634955-6635954 Phaseolus vulgaris
Phvul.002G060300 2.0kb upstream 2.0kb upstream 2890 true Chr02: 6632065-6634954 Phaseolus vulgaris
Phvul.002G060300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6632065-6634064 Phaseolus vulgaris
Phvul.002G060300 2.0kb downstream 2.0kb downstream 2890 true Chr02: 6634065-6636954 Phaseolus vulgaris
Phvul.002G060300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6634955-6636954 Phaseolus vulgaris
Phvul.002G060300 5.0kb upstream 5.0kb upstream 5890 true Chr02: 6629065-6634954 Phaseolus vulgaris
Phvul.002G060300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6629065-6634064 Phaseolus vulgaris
Phvul.002G060300 5.0kb downstream 5.0kb downstream 5890 true Chr02: 6634065-6639954 Phaseolus vulgaris
Phvul.002G060300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6634955-6639954 Phaseolus vulgaris
Phvul.002G060300 10.0kb upstream 10.0kb upstream 10890 true Chr02: 6624065-6634954 Phaseolus vulgaris
Phvul.002G060300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6624065-6634064 Phaseolus vulgaris
Phvul.002G060300 10.0kb downstream 10.0kb downstream 10890 true Chr02: 6634065-6644954 Phaseolus vulgaris
Phvul.002G060300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6634955-6644954 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308882 5265 Fabidae View MSA
124064852 5270 Rosid View MSA
123751237 5271 Pentapetalae View MSA
122789537 5272 Eudicot View MSA
122042465 5273 Angiosperm View MSA
121309969 5274 Embryophyte View MSA
123347587 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 206.978 0.0 573.289 High  
cufflinks 274.068 0.0 780.851 High  
cufflinks 241.881 0.0 675.644 High  
cufflinks 369.817 0.0 1109.21 High High
cufflinks 315.686 0.0 926.945 High  
cufflinks 192.72 0.0 527.844 High  
cufflinks 186.915 0.0 514.407 High  
cufflinks 157.145 0.0 422.572 High Low
cufflinks 263.829 0.0 753.212 High  
cufflinks 198.427 0.0 546.984 High  
cufflinks 377.077 0.0 1131.4 High High

0 Strain