Gene : Phvul.002G060100 P. vulgaris v2.1
Defline:  (1 of 1) K06980 - uncharacterized protein (K06980) Genomic Order:  601
Name:  ? Phvul.002G060100 Secondary Identifier:  ? PAC:37176620
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G060100 0.5kb upstream 0.5kb upstream 3830 true Chr02: 6621793-6625622 Phaseolus vulgaris
Phvul.002G060100 0.5kb upstream 0.5kb upstream 500 false Chr02: 6621793-6622292 Phaseolus vulgaris
Phvul.002G060100 0.5kb downstream 0.5kb downstream 3830 true Chr02: 6622293-6626122 Phaseolus vulgaris
Phvul.002G060100 0.5kb downstream 0.5kb downstream 500 false Chr02: 6625623-6626122 Phaseolus vulgaris
Phvul.002G060100 1.0kb upstream 1.0kb upstream 4330 true Chr02: 6621293-6625622 Phaseolus vulgaris
Phvul.002G060100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6621293-6622292 Phaseolus vulgaris
Phvul.002G060100 1.0kb downstream 1.0kb downstream 4330 true Chr02: 6622293-6626622 Phaseolus vulgaris
Phvul.002G060100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6625623-6626622 Phaseolus vulgaris
Phvul.002G060100 2.0kb upstream 2.0kb upstream 5330 true Chr02: 6620293-6625622 Phaseolus vulgaris
Phvul.002G060100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6620293-6622292 Phaseolus vulgaris
Phvul.002G060100 2.0kb downstream 2.0kb downstream 5330 true Chr02: 6622293-6627622 Phaseolus vulgaris
Phvul.002G060100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6625623-6627622 Phaseolus vulgaris
Phvul.002G060100 5.0kb upstream 5.0kb upstream 8330 true Chr02: 6617293-6625622 Phaseolus vulgaris
Phvul.002G060100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6617293-6622292 Phaseolus vulgaris
Phvul.002G060100 5.0kb downstream 5.0kb downstream 8330 true Chr02: 6622293-6630622 Phaseolus vulgaris
Phvul.002G060100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6625623-6630622 Phaseolus vulgaris
Phvul.002G060100 10.0kb upstream 10.0kb upstream 13330 true Chr02: 6612293-6625622 Phaseolus vulgaris
Phvul.002G060100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6612293-6622292 Phaseolus vulgaris
Phvul.002G060100 10.0kb downstream 10.0kb downstream 13330 true Chr02: 6622293-6635622 Phaseolus vulgaris
Phvul.002G060100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6625623-6635622 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305752 5265 Fabidae View MSA
124067186 5270 Rosid View MSA
123745286 5271 Pentapetalae View MSA
122786826 5272 Eudicot View MSA
122047678 5273 Angiosperm View MSA
121345221 5274 Embryophyte View MSA
123428171 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2528 0.0 44.9136   High
cufflinks 12.6962 0.0 33.593    
cufflinks 10.7807 0.0 28.9193    
cufflinks 14.6854 0.0 38.5083   High
cufflinks 7.64929 0.0 21.0856    
cufflinks 7.45079 0.0 20.5831    
cufflinks 5.25076 0.0 14.9101   Low
cufflinks 6.61221 0.0 18.4387    
cufflinks 6.09543 0.0 17.0863   Low
cufflinks 9.72517 0.0 26.2503    
cufflinks 8.20176 0.0 22.4392    

0 Strain