Gene : Phvul.002G048300 P. vulgaris v2.1
Defline:  (1 of 14) PF04833 - COBRA-like protein (COBRA) Genomic Order:  484
Name:  ? Phvul.002G048300 Secondary Identifier:  ? PAC:37177455
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G048300 0.5kb upstream 0.5kb upstream 3245 true Chr02: 4501237-4504481 Phaseolus vulgaris
Phvul.002G048300 0.5kb upstream 0.5kb upstream 500 false Chr02: 4503982-4504481 Phaseolus vulgaris
Phvul.002G048300 0.5kb downstream 0.5kb downstream 3245 true Chr02: 4500737-4503981 Phaseolus vulgaris
Phvul.002G048300 0.5kb downstream 0.5kb downstream 500 false Chr02: 4500737-4501236 Phaseolus vulgaris
Phvul.002G048300 1.0kb upstream 1.0kb upstream 3745 true Chr02: 4501237-4504981 Phaseolus vulgaris
Phvul.002G048300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4503982-4504981 Phaseolus vulgaris
Phvul.002G048300 1.0kb downstream 1.0kb downstream 3745 true Chr02: 4500237-4503981 Phaseolus vulgaris
Phvul.002G048300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4500237-4501236 Phaseolus vulgaris
Phvul.002G048300 2.0kb upstream 2.0kb upstream 4745 true Chr02: 4501237-4505981 Phaseolus vulgaris
Phvul.002G048300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4503982-4505981 Phaseolus vulgaris
Phvul.002G048300 2.0kb downstream 2.0kb downstream 4745 true Chr02: 4499237-4503981 Phaseolus vulgaris
Phvul.002G048300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4499237-4501236 Phaseolus vulgaris
Phvul.002G048300 5.0kb upstream 5.0kb upstream 7745 true Chr02: 4501237-4508981 Phaseolus vulgaris
Phvul.002G048300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4503982-4508981 Phaseolus vulgaris
Phvul.002G048300 5.0kb downstream 5.0kb downstream 7745 true Chr02: 4496237-4503981 Phaseolus vulgaris
Phvul.002G048300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4496237-4501236 Phaseolus vulgaris
Phvul.002G048300 10.0kb upstream 10.0kb upstream 12745 true Chr02: 4501237-4513981 Phaseolus vulgaris
Phvul.002G048300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4503982-4513981 Phaseolus vulgaris
Phvul.002G048300 10.0kb downstream 10.0kb downstream 12745 true Chr02: 4491237-4503981 Phaseolus vulgaris
Phvul.002G048300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4491237-4501236 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303315 5265 Fabidae View MSA
124070578 5270 Rosid View MSA
123737014 5271 Pentapetalae View MSA
122788609 5272 Eudicot View MSA
122048616 5273 Angiosperm View MSA
121351657 5274 Embryophyte View MSA
123382264 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0168839 0.0 0.0836767 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0309114 0.0 0.143588 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00873856 0.0 0.0467416 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain