Gene : Phvul.002G049900 P. vulgaris v2.1
Defline:  (1 of 1) K07203 - FKBP12-rapamycin complex-associated protein (FRAP) Genomic Order:  501
Name:  ? Phvul.002G049900 Secondary Identifier:  ? PAC:37177069
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G049900 0.5kb upstream 0.5kb upstream 32155 true Chr02: 4626023-4658177 Phaseolus vulgaris
Phvul.002G049900 0.5kb upstream 0.5kb upstream 500 false Chr02: 4626023-4626522 Phaseolus vulgaris
Phvul.002G049900 0.5kb downstream 0.5kb downstream 32155 true Chr02: 4626523-4658677 Phaseolus vulgaris
Phvul.002G049900 0.5kb downstream 0.5kb downstream 500 false Chr02: 4658178-4658677 Phaseolus vulgaris
Phvul.002G049900 1.0kb upstream 1.0kb upstream 32655 true Chr02: 4625523-4658177 Phaseolus vulgaris
Phvul.002G049900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4625523-4626522 Phaseolus vulgaris
Phvul.002G049900 1.0kb downstream 1.0kb downstream 32655 true Chr02: 4626523-4659177 Phaseolus vulgaris
Phvul.002G049900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4658178-4659177 Phaseolus vulgaris
Phvul.002G049900 2.0kb upstream 2.0kb upstream 33655 true Chr02: 4624523-4658177 Phaseolus vulgaris
Phvul.002G049900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4624523-4626522 Phaseolus vulgaris
Phvul.002G049900 2.0kb downstream 2.0kb downstream 33655 true Chr02: 4626523-4660177 Phaseolus vulgaris
Phvul.002G049900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4658178-4660177 Phaseolus vulgaris
Phvul.002G049900 5.0kb upstream 5.0kb upstream 36655 true Chr02: 4621523-4658177 Phaseolus vulgaris
Phvul.002G049900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4621523-4626522 Phaseolus vulgaris
Phvul.002G049900 5.0kb downstream 5.0kb downstream 36655 true Chr02: 4626523-4663177 Phaseolus vulgaris
Phvul.002G049900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4658178-4663177 Phaseolus vulgaris
Phvul.002G049900 10.0kb upstream 10.0kb upstream 41655 true Chr02: 4616523-4658177 Phaseolus vulgaris
Phvul.002G049900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4616523-4626522 Phaseolus vulgaris
Phvul.002G049900 10.0kb downstream 10.0kb downstream 41655 true Chr02: 4626523-4668177 Phaseolus vulgaris
Phvul.002G049900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4658178-4668177 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300589 5265 Fabidae View MSA
124067131 5270 Rosid View MSA
123738619 5271 Pentapetalae View MSA
122787164 5272 Eudicot View MSA
122042776 5273 Angiosperm View MSA
121350854 5274 Embryophyte View MSA
123426906 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.29153 0.0 7.97637   Low
cufflinks 8.99171 0.0 30.579    
cufflinks 14.5756 0.0 45.4913    
cufflinks 3.32621 0.0 11.2024   Low
cufflinks 15.2012 0.0 56.4662    
cufflinks 16.2384 0.0 61.104    
cufflinks 14.657 0.0 53.3417    
cufflinks 11.6812 0.0 40.7569    
cufflinks 15.019 0.0 55.4173    
cufflinks 36.2885 0.0 150.603 High High
cufflinks 10.424 0.0 36.2381    

0 Strain